RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 GPATCH1Q9BRR8 931 aaKnown RBP15.83■□□□□ 0.13
LIMK2-203ENST00000340552 ST6GALNAC4Q9H4F1 302 aa15.83■□□□□ 0.13
LIMK2-203ENST00000340552 RBPJLQ9UBG7 517 aa15.83■□□□□ 0.13
LIMK2-203ENST00000340552 SEPT9Q9UHD8 586 aaPredicted RBP15.83■□□□□ 0.13
LIMK2-203ENST00000340552 GPC6Q9Y625 555 aaPredicted RBP15.83■□□□□ 0.13
LIMK2-203ENST00000340552 TISP43B9A030 160 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 CYB561D2O14569 222 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 GRIN3BO60391 1043 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 ITGAXP20702 1163 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 OSBPP22059 807 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 EDNRBP24530 442 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 PPARGP37231 505 aaPredicted RBP15.83■□□□□ 0.12
LIMK2-203ENST00000340552 RAB15P59190 212 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 PTP4A2Q12974 167 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 Q3C1V9 767 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 TMEM214Q6NUQ4 689 aaKnown RBP15.83■□□□□ 0.12
LIMK2-203ENST00000340552 RHPN2Q8IUC4 686 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 SLC7A5P1Q8MH63 180 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 CENPSQ8N2Z9 138 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 CCDC33Q8N5R6 958 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 VTI1AQ96AJ9 217 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 SLC2A11Q9BYW1 496 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 PAIP1Q9H074 479 aaKnown RBP15.83■□□□□ 0.12
LIMK2-203ENST00000340552 XPNPEP1Q9NQW7 623 aa15.83■□□□□ 0.12
LIMK2-203ENST00000340552 PI4K2BG5E9Z4 385 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 GJA5P36382 358 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 EIF2B2P49770 351 aaKnown RBP15.82■□□□□ 0.12
LIMK2-203ENST00000340552 MYBPC2Q14324 1141 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 RARS2Q5T160 578 aaKnown RBP15.82■□□□□ 0.12
LIMK2-203ENST00000340552 C6orf183Q5T699 404 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 LDLRAD1Q5T700 205 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 OGFOD2Q6N063 350 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 GPAT2Q6NUI2 795 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 FBXW8Q8N3Y1 598 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 GALNT4Q8N4A0 578 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 PCIF1Q9H4Z3 704 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 IQANK1A0A1B0GTG1 560 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.82■□□□□ 0.12
LIMK2-203ENST00000340552 TMX2-CTNND1H3BSU7 103 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 SOX10P56693 466 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 DMP1Q13316 513 aaPredicted RBP15.82■□□□□ 0.12
LIMK2-203ENST00000340552 CRLF3Q8IUI8 442 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 DDX1Q92499 740 aaKnown RBP15.82■□□□□ 0.12
LIMK2-203ENST00000340552 DCUN1D5Q9BTE7 237 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 ZNF408Q9H9D4 720 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 EBF1Q9UH73 591 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 PACSIN3Q9UKS6 424 aa15.82■□□□□ 0.12
LIMK2-203ENST00000340552 COPEO14579 308 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 DGAT1O75907 488 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 IFNB1P01574 187 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 NPTX2P47972 431 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 ADGRE1Q14246 886 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 ATG16L1Q676U5 607 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 NEPROQ6NW34 567 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 DCLRE1AQ6PJP8 1040 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 EEPD1Q7L9B9 569 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 KATNAL2Q8IYT4 538 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 SLC10A4Q96EP9 437 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 HAUS8Q9BT25 410 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 CYP26B1Q9NR63 512 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 IGSF9Q9P2J2 1179 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 CAPN15O75808 1086 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 ATG7O95352 703 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 LDHAP00338 332 aaKnown RBP15.81■□□□□ 0.12
LIMK2-203ENST00000340552 PGK2P07205 417 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 ZNF12P17014 697 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 UBA1P22314 1058 aaKnown RBP15.81■□□□□ 0.12
LIMK2-203ENST00000340552 CDK18Q07002 472 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 ATP1A4Q13733 1029 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 ATP13A4Q4VNC1 1196 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 XKR3Q5GH77 459 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 C1orf220Q5T0J3 134 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 NANOGP8Q6NSW7 305 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 RHOT1Q8IXI2 618 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 PALM2Q8IXS6 379 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 TMEM161BQ8NDZ6 487 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 SHC3Q92529 594 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 PLEKHA8Q96JA3 519 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 LRGUKQ96M69 825 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 CBWD1Q9BRT8 395 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 KIFC3Q9BVG8 833 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 SIRPGQ9P1W8 387 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 RIMS3Q9UJD0 308 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 ITGA11Q9UKX5 1188 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 SORCS3Q9UPU3 1222 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 RNF11Q9Y3C5 154 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 FARP1Q9Y4F1 1045 aaPredicted RBP15.81■□□□□ 0.12
LIMK2-203ENST00000340552 SOBPA7XYQ1 873 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 PSTPIP1O43586 416 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 ZMPSTE24O75844 475 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 PROSCO94903 275 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 ZBTB11O95625 1053 aaPredicted RBP15.81■□□□□ 0.12
LIMK2-203ENST00000340552 NAT1P18440 290 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 NELFEP18615 380 aaKnown RBP15.81■□□□□ 0.12
LIMK2-203ENST00000340552 CDH3P22223 829 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 NDST2P52849 883 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 CTBSQ01459 385 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 CETN1Q12798 172 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 MTERF2Q49AM1 385 aa15.81■□□□□ 0.12
LIMK2-203ENST00000340552 C12orf56Q8IXR9 622 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms