RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 NME3Q13232 169 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 PPP2R5DQ14738 602 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 UBXN2BQ14CS0 331 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 FAM133BQ5BKY9 247 aaKnown RBP13.35□□□□□ -0.27
SRSF3-201ENST00000339436 ZC3H12AQ5D1E8 599 aaKnown RBP13.35□□□□□ -0.27
SRSF3-201ENST00000339436 ADGRF1Q5T601 910 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 ASTLQ6HA08 431 aaPredicted RBP13.35□□□□□ -0.27
SRSF3-201ENST00000339436 BNIPLQ7Z465 357 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 C12orf40Q86WS4 652 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 SUGP1Q8IWZ8 645 aaKnown RBP13.35□□□□□ -0.27
SRSF3-201ENST00000339436 ETFBKMTQ8IXQ9 262 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 CCDC105Q8IYK2 499 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 AZIN2Q96A70 460 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 ZNF653Q96CK0 615 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 TRIM11Q96F44 468 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 MCEEQ96PE7 176 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 PIGVQ9NUD9 493 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 COX16Q9P0S2 106 aa13.35□□□□□ -0.27
SRSF3-201ENST00000339436 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 GFRA2O00451 464 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 STK25O00506 426 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 TRDMT1O14717 391 aaKnown RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 CACNG3O60359 315 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 ADCY5O95622 1261 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 MOCS2O96007 188 aaPredicted RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 SLC2A3P11169 496 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 PDGFRAP16234 1089 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 SDC4P31431 198 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 RFC1P35251 1148 aaPredicted RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 OPRD1P41143 372 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 EIF2DP41214 584 aaKnown RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 PTPN9P43378 593 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 CLCN5P51795 746 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 GFPT1Q06210 699 aaPredicted RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 PON2Q15165 354 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 SLC18A3Q16572 532 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 ASTE1Q2TB18 679 aaPredicted RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 ANO4Q32M45 955 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 NADSYN1Q6IA69 706 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 PLEKHA7Q6IQ23 1121 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 ALKBH5Q6P6C2 394 aaKnown RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 TPGS1Q6ZTW0 290 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 RXFP2Q8WXD0 754 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 P2RY11Q96G91 374 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 CHP1Q99653 195 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 LRFN3Q9BTN0 628 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 BBS2Q9BXC9 721 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 OSBPL6Q9BZF3 934 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 DEF6Q9H4E7 631 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 PARVAQ9NVD7 372 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 XPO7Q9UIA9 1087 aaKnown RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 NDRG2Q9UN36 371 aaKnown RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 MTF2Q9Y483 593 aaPredicted RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 CHD5Q8TDI0 1954 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 KCNU1A8MYU2 1149 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 ACSL4O60488 711 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 PENKP01210 267 aaPredicted RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 TYRP14679 529 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 GPD1P21695 349 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 SLC6A4P31645 630 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 RDXP35241 583 aaKnown RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 CXCR3P49682 368 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 RPL7AP62424 266 aaKnown RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 ATP11AP98196 1134 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 DEUP1Q05D60 604 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 MAMLD1Q13495 774 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 CCINQ13939 588 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 CCDC14Q49A88 953 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 TMEM196Q5HYL7 178 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 FYB2Q5VWT5 728 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 TMEM105Q8N8V8 129 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 CD101Q93033 1021 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 BHMTQ93088 406 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 BTN2A3PQ96KV6 586 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 PRICKLE1Q96MT3 831 aaPredicted RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 NELL2Q99435 816 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 P2RY13Q9BPV8 354 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 TMEM51Q9NW97 253 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 CNOT8Q9UFF9 292 aaKnown RBP13.34□□□□□ -0.27
SRSF3-201ENST00000339436 SIT1Q9Y3P8 196 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 PAXBP1Q9Y5B6 917 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 SCINQ9Y6U3 715 aa13.34□□□□□ -0.27
SRSF3-201ENST00000339436 ANKRD62A6NC57 917 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 FAM170BA6NMN3 283 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.33□□□□□ -0.28
SRSF3-201ENST00000339436 AKR1B10O60218 316 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 TULP3O75386 442 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 F9P00740 461 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 CYBBP04839 570 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 ABCB4P21439 1286 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 ZNF143P52747 638 aaPredicted RBP13.33□□□□□ -0.28
SRSF3-201ENST00000339436 ATXN1P54253 815 aaKnown RBP13.33□□□□□ -0.28
SRSF3-201ENST00000339436 GRSF1Q12849 480 aaKnown RBP eCLIP13.33□□□□□ -0.28
SRSF3-201ENST00000339436 MTA1Q13330 715 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 CDO1Q16878 200 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 C15orf59Q2T9L4 293 aaPredicted RBP13.33□□□□□ -0.28
SRSF3-201ENST00000339436 BRMS1LQ5PSV4 323 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms