RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 FRMD4BQ9Y2L6 1034 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 SNX11Q9Y5W9 270 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 SLCO1B1Q9Y6L6 691 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 GCN1Q92616 2671 aaKnown RBP12.04□□□□□ -0.48
CSMD2-202ENST00000338325 CELSR3Q9NYQ7 3312 aa12.04□□□□□ -0.48
CSMD2-202ENST00000338325 COL5A1P20908 1838 aaPredicted RBP12.03□□□□□ -0.48
CSMD2-202ENST00000338325 SMG1Q96Q15 3661 aaKnown RBP12.03□□□□□ -0.48
CSMD2-202ENST00000338325 TIMM44O43615 452 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 HLA-EP13747 358 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 VAMP7P51809 220 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 KIF19Q2TAC6 998 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 RESP18Q5W5W9 173 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 RSRC2Q7L4I2 434 aaKnown RBP12.03□□□□□ -0.48
CSMD2-202ENST00000338325 MARCH9Q86YJ5 346 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 FAM217AQ8IXS0 508 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 CEP57L1Q8IYX8 460 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 PLD4Q96BZ4 506 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 BBC3Q96PG8 261 aaPredicted RBP12.03□□□□□ -0.48
CSMD2-202ENST00000338325 C6orf106Q9H6K1 298 aaPredicted RBP12.03□□□□□ -0.48
CSMD2-202ENST00000338325 TM9SF3Q9HD45 589 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 OSGEPQ9NPF4 335 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.03□□□□□ -0.48
CSMD2-202ENST00000338325 ANKRD6Q9Y2G4 727 aa12.03□□□□□ -0.48
CSMD2-202ENST00000338325 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.03□□□□□ -0.48
CSMD2-202ENST00000338325 NYNRINQ9P2P1 1898 aaKnown RBP12.02□□□□□ -0.48
CSMD2-202ENST00000338325 SLC12A8A0AV02 714 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 TRABD2BA6NFA1 517 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 EIF4E1BA6NMX2 242 aaKnown RBP12.02□□□□□ -0.48
CSMD2-202ENST00000338325 MAPK13O15264 365 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 TNFSF14O43557 240 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 C7P10643 843 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 ACSL1P33121 698 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 GRK6P43250 576 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 GRIA4P48058 902 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 CCT8P50990 548 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 YWHAGP61981 247 aaKnown RBP eCLIP12.02□□□□□ -0.48
CSMD2-202ENST00000338325 CYP4F3Q08477 520 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 CAMK2BQ13554 666 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 KMT5BQ4FZB7 885 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 FNDC3BQ53EP0 1204 aaKnown RBP12.02□□□□□ -0.48
CSMD2-202ENST00000338325 MPPE1Q53F39 396 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 CCDC150Q8NCX0 1101 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 TAS1R2Q8TE23 839 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 WFIKKN2Q8TEU8 576 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 IGSF8Q969P0 613 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 FBRSQ9HAH7 460 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 SERTAD1Q9UHV2 236 aa12.02□□□□□ -0.48
CSMD2-202ENST00000338325 CABIN1Q9Y6J0 2220 aa12.02□□□□□ -0.49
CSMD2-202ENST00000338325 GOLGA4Q13439 2230 aaKnown RBP12.02□□□□□ -0.49
CSMD2-202ENST00000338325 CALUO43852 315 aaPredicted RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 PCDHGA12O60330 932 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 SEMA4FO95754 770 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 HOXD9P28356 352 aaPredicted RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 ME1P48163 572 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 GCLMP48507 274 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 PDE4CQ08493 712 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 SMAD1Q15797 465 aaKnown RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 PTPRNQ16849 979 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 INAVAQ3KP66 663 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 ZNF394Q53GI3 561 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 RAB41Q5JT25 222 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 SCUBE3Q8IX30 993 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 PDCD7Q8N8D1 485 aaKnown RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 UBXN6Q9BZV1 441 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 BTBD1Q9H0C5 482 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 TMEM245Q9H330 911 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 PCDHA7Q9UN72 937 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 URB1O60287 2271 aaKnown RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 SHROOM3Q8TF72 1996 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 A0A087WV48 116 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 FAM149AA5PLN7 773 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 E9PAM4 449 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 K7ELQ4 463 aaPredicted RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 ACTN4O43707 911 aaKnown RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 TSPAN3O60637 253 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 DNTTP04053 509 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 SLFN14P0C7P3 912 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 TRIM49P0CI25 452 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 TRIM49CP0CI26 452 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 CD27P26842 260 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 HLA-FP30511 346 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 ZNF445P59923 1031 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 RPS14P62263 151 aaKnown RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 ZBTB16Q05516 673 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 PPP3CAQ08209 521 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 TRIP4Q15650 581 aaPredicted RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 LAYNQ6UX15 382 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 INTS8Q75QN2 995 aaKnown RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 CHST9Q7L1S5 443 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 PIGZQ86VD9 579 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 ZNF366Q8N895 744 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 CYB5D2Q8WUJ1 264 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 BIRC7Q96CA5 298 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 PAGE5Q96GU1 130 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 HEXIM2Q96MH2 286 aaKnown RBP12.01□□□□□ -0.49
CSMD2-202ENST00000338325 ARID3AQ99856 593 aa12.01□□□□□ -0.49
CSMD2-202ENST00000338325 MMRN2Q9H8L6 949 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms