RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ANKRD27Q96NW4 1050 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 SLC17A6Q9P2U8 582 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 BARX2Q9UMQ3 279 aaPredicted RBP17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 C2CD4BA6NLJ0 364 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 CYP2F1P24903 491 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 SLC18A2Q05940 514 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 CCDC142Q17RM4 750 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 TREML1Q86YW5 311 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 TMPRSS6Q8IU80 811 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 ENDOVQ8N8Q3 282 aaKnown RBP17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 OTUD5Q96G74 571 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 MMP19Q99542 508 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 GPR20Q99678 358 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 SPATA16Q9BXB7 569 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 ADAMTS5Q9UNA0 930 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 CSADQ9Y600 493 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 IGKV6D-21A0A0A0MT36 114 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 PRR5-ARHGAP8B1AHC4 643 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 NDUFB5O43674 189 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 LYPLA1O75608 230 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 OR6B1O95007 311 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 METTL18O95568 372 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 TGFB3P10600 412 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 RPS12P25398 132 aaKnown RBP17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 ARHGAP8P85298 464 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 ACAP1Q15027 740 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 PMF1Q6P1K2 205 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 ZNF333Q96JL9 665 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 R3HDMLQ9H3Y0 253 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 USP29Q9HBJ7 922 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 PCDH18Q9HCL0 1135 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 DPP3Q9NY33 737 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 IL1RAPL1Q9NZN1 696 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 LRCH1Q9Y2L9 728 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 TTLL3Q9Y4R7 772 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 TGDSO95455 350 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 CCDC14Q49A88 953 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 GLRA4Q5JXX5 417 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 PPP1R26Q5T8A7 1209 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 KCNT2Q6UVM3 1135 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 CES3Q6UWW8 571 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 TUBGCP5Q96RT8 1024 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 LPIN3Q9BQK8 851 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 EBF4Q9BQW3 602 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 SMYD2Q9NRG4 433 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 KCNK4Q9NYG8 393 aa17.03■□□□□ 0.32
CDC42EP4-201ENST00000335793 IQCF3P0C7M6 154 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 RBP5P82980 135 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 AP1B1Q10567 949 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 PDK2Q15119 407 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 SLC44A4Q53GD3 710 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 CAND1Q86VP6 1230 aaKnown RBP17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 EXOC8Q8IYI6 725 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 STKLD1Q8NE28 680 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 PPP4R1Q8TF05 950 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 CDKL2Q92772 493 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 CORO1BQ9BR76 489 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 RNPEPQ9H4A4 650 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 SMARCAD1Q9H4L7 1026 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 PRMT7Q9NVM4 692 aaPredicted RBP17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 ANGPTL2Q9UKU9 493 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 APOBEC2Q9Y235 224 aaKnown RBP17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 DNAJC16Q9Y2G8 782 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 WDR27A2RRH5 827 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 SLC15A5A6NIM6 579 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 RARBP10826 455 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 FASTKD1Q53R41 847 aaKnown RBP17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 TRNP1Q6NT89 227 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 CDKL3Q8IVW4 592 aaPredicted RBP17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 GSDMBQ8TAX9 411 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 TRPM4Q8TD43 1214 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 C17orf50Q8WW18 174 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 FAM136AQ96C01 138 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 C12orf42Q96LP6 360 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 FZD8Q9H461 694 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 POPDC2Q9HBU9 364 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 PFDN4Q9NQP4 134 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 TMCO1Q9UM00 188 aa17.02■□□□□ 0.32
CDC42EP4-201ENST00000335793 INSRRP14616 1297 aa17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 TSHRP16473 764 aa17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 LBX2Q6XYB7 198 aa17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 APOBEC3FQ8IUX4 373 aaKnown RBP17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 NRG4Q8WWG1 115 aa17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 IFT43Q96FT9 208 aa17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 AGAP3Q96P47 875 aa17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 SLX1AQ9BQ83 275 aa17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 VPS33BQ9H267 617 aa17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 NDE1Q9NXR1 346 aa17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 TUBGCP4Q9UGJ1 667 aa17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 TNFSF13BQ9Y275 285 aa17.02■□□□□ 0.31
CDC42EP4-201ENST00000335793 NAT1P18440 290 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 SAT1P21673 171 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 SLC25A3Q00325 362 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 SPATA24Q86W54 205 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 SLC26A7Q8TE54 656 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 BCO2Q9BYV7 579 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 PDGFCQ9NRA1 345 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 TAGLN3Q9UI15 199 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 A8MXQ7 604 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 TXNDC9O14530 226 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms