RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 CUL2Q13617 745 aa17.54■□□□□ 0.4
PDCD1-201ENST00000334409 TRMT5Q32P41 509 aaKnown RBP17.54■□□□□ 0.4
PDCD1-201ENST00000334409 XKR4Q5GH76 650 aa17.54■□□□□ 0.4
PDCD1-201ENST00000334409 IZUMO2Q6UXV1 221 aa17.54■□□□□ 0.4
PDCD1-201ENST00000334409 SLC24A5Q71RS6 500 aa17.54■□□□□ 0.4
PDCD1-201ENST00000334409 SMYD1Q8NB12 490 aa17.54■□□□□ 0.4
PDCD1-201ENST00000334409 BEST2Q8NFU1 509 aa17.54■□□□□ 0.4
PDCD1-201ENST00000334409 HPDLQ96IR7 371 aa17.54■□□□□ 0.4
PDCD1-201ENST00000334409 SSU72Q9NP77 194 aaKnown RBP17.54■□□□□ 0.4
PDCD1-201ENST00000334409 METTL5Q9NRN9 209 aaKnown RBP17.54■□□□□ 0.4
PDCD1-201ENST00000334409 TBCCD1Q9NVR7 557 aa17.54■□□□□ 0.4
PDCD1-201ENST00000334409 NDE1Q9NXR1 346 aa17.54■□□□□ 0.4
PDCD1-201ENST00000334409 SH3GLB1Q9Y371 365 aa17.54■□□□□ 0.4
PDCD1-201ENST00000334409 ATF2P15336 505 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 KCNE1P15382 129 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 ITGA8P53708 1063 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 CDH8P55286 799 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 CYLC2Q14093 348 aaPredicted RBP17.53■□□□□ 0.4
PDCD1-201ENST00000334409 MTDHQ86UE4 582 aaKnown RBP17.53■□□□□ 0.4
PDCD1-201ENST00000334409 HACE1Q8IYU2 909 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 WDR60Q8WVS4 1066 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 SEPT8Q92599 483 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 TSPYL2Q9H2G4 693 aaPredicted RBP17.53■□□□□ 0.4
PDCD1-201ENST00000334409 ETNK2Q9NVF9 386 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 HSFX1Q9UBD0 423 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 ITGA11Q9UKX5 1188 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 UBQLN1Q9UMX0 589 aaKnown RBP17.53■□□□□ 0.4
PDCD1-201ENST00000334409 NEU2Q9Y3R4 380 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 RALGAPA2Q2PPJ7 1873 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 ANPEPP15144 967 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 SERPINB3P29508 390 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 PHEXP78562 749 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 RBP5P82980 135 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 CBX3Q13185 183 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 ZNF394Q53GI3 561 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 C9orf57Q5W0N0 161 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 ZNF598Q86UK7 904 aaKnown RBP17.53■□□□□ 0.4
PDCD1-201ENST00000334409 VWCEQ96DN2 955 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 PPP1R10Q96QC0 940 aaKnown RBP17.53■□□□□ 0.4
PDCD1-201ENST00000334409 PAAF1Q9BRP4 392 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 RHBDL2Q9NX52 303 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 GIT1Q9Y2X7 761 aa17.53■□□□□ 0.4
PDCD1-201ENST00000334409 A0A0J9YVX5 310 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 BIRC5O15392 142 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 PSTPIP1O43586 416 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 PROSCO94903 275 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 RRM1P23921 792 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 GATMP50440 423 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 SERPINB8P50452 374 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 PSMD7P51665 324 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 KLF1Q13351 362 aaPredicted RBP17.52■□□□□ 0.4
PDCD1-201ENST00000334409 RASA2Q15283 850 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 B3GNT6Q6ZMB0 384 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 OTOAQ7RTW8 1153 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 NT5DC4Q86YG4 428 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 DTX3LQ8TDB6 740 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 MPP4Q96JB8 637 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 DDX50Q9BQ39 737 aaKnown RBP17.52■□□□□ 0.4
PDCD1-201ENST00000334409 OSBPL8Q9BZF1 889 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 SMYD3Q9H7B4 428 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 ANAPC5Q9UJX4 755 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 MTO1Q9Y2Z2 717 aaKnown RBP17.52■□□□□ 0.4
PDCD1-201ENST00000334409 DERAQ9Y315 318 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 PCDHB4Q9Y5E5 795 aa17.52■□□□□ 0.4
PDCD1-201ENST00000334409 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.4
PDCD1-201ENST00000334409 CASTOR2A6NHX0 329 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 FKBP6O75344 327 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 CIB2O75838 187 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 THP07101 528 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 CSF2RAP15509 400 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 SSTR3P32745 418 aaPredicted RBP17.51■□□□□ 0.39
PDCD1-201ENST00000334409 ASPAP45381 313 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 NEK3P51956 506 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 ASPHQ12797 758 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 ORC1Q13415 861 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 THOC5Q13769 683 aaKnown RBP17.51■□□□□ 0.39
PDCD1-201ENST00000334409 TMED2Q15363 201 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 ADRM1Q16186 407 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 CCNG2Q16589 344 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.51■□□□□ 0.39
PDCD1-201ENST00000334409 HSP90AA5PQ58FG0 334 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 ZNF667Q5HYK9 610 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 TMEM270Q6UE05 265 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 TRIM72Q6ZMU5 477 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 ATG4AQ8WYN0 398 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 PGBD4Q96DM1 585 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 NIF3L1Q9GZT8 377 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 TMEM165Q9HC07 324 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 SLCO1B3Q9NPD5 702 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.51■□□□□ 0.39
PDCD1-201ENST00000334409 AP1G1O43747 822 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 ACRP10323 421 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 CCNFP41002 786 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 CETN2P41208 172 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 NSFP46459 744 aaKnown RBP17.51■□□□□ 0.39
PDCD1-201ENST00000334409 CFAP157Q5JU67 520 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 CLLU1OSQ5K130 101 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 MON1BQ7L1V2 547 aa17.51■□□□□ 0.39
PDCD1-201ENST00000334409 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.51■□□□□ 0.39
PDCD1-201ENST00000334409 CCDC89Q8N998 374 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms