RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SEL1L3Q68CR1 1132 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 MPZL3Q6UWV2 235 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 MILR1Q7Z6M3 343 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 DENND6AQ8IWF6 608 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 WDR41Q9HAD4 459 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 TOR4AQ9NXH8 423 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 CTNNAL1Q9UBT7 734 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 DUSP12Q9UNI6 340 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 FAM50BQ9Y247 325 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 ERVK-7P63135 1459 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 A0A1B0GW55 424 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 DUX4L2P0CJ85 424 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 DUX4L3P0CJ86 424 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 DUX4L4P0CJ87 422 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 DUX4L5P0CJ88 424 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 DUX4L6P0CJ89 424 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 DUX4L7P0CJ90 424 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 VAV1P15498 845 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 DSG1Q02413 1049 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 SCRN3Q0VDG4 424 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 PLEKHA7Q6IQ23 1121 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.82□□□□□ -0.68
CLN8-201ENST00000331222 TRAPPC11Q7Z392 1133 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 RXFP2Q8WXD0 754 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 CD248Q9HCU0 757 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 PXMP2Q9NR77 195 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 DUX4Q9UBX2 424 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 UBQLN1Q9UMX0 589 aaKnown RBP10.82□□□□□ -0.68
CLN8-201ENST00000331222 BUD23O43709 281 aaKnown RBP10.82□□□□□ -0.68
CLN8-201ENST00000331222 LSP1P33241 339 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 FDFT1P37268 417 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 CYP4F2P78329 520 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 TGM3Q08188 693 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 CYP4F3Q08477 520 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 GPR141Q7Z602 305 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 ATP6V1C2Q8NEY4 427 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 GON4LQ3T8J9 2241 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 SMIM31A0A1B0GVY4 71 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 MTA2O94776 668 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 TBX4P57082 545 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 BIKQ13323 160 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 GRIK4Q16099 956 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 PKN1Q16512 942 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 PDZK1Q5T2W1 519 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 PDPK2PQ6A1A2 396 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 TPCN2Q8NHX9 752 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 TMEM159Q96B96 161 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 CRAMP1Q96RY5 1269 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 GLIS2Q9BZE0 524 aaPredicted RBP10.82□□□□□ -0.68
CLN8-201ENST00000331222 ADARB2Q9NS39 739 aaKnown RBP10.82□□□□□ -0.68
CLN8-201ENST00000331222 DCDC2Q9UHG0 476 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 ARHGEF40Q8TER5 1519 aa10.82□□□□□ -0.68
CLN8-201ENST00000331222 SDR42E2A6NKP2 422 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 UNC13BO14795 1591 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 IL1R1P14778 569 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 NFKB1P19838 968 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 BCAT1P54687 386 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 RPL10AP62906 217 aaKnown RBP10.81□□□□□ -0.68
CLN8-201ENST00000331222 INAQ16352 499 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 DDR2Q16832 855 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 OVOS1Q6IE37 1185 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 FBXL19Q6PCT2 694 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 MROH8Q9H579 483 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 C10orf88Q9H8K7 445 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 SESN1Q9Y6P5 492 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 CCDC154A6NI56 674 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 SCAMP1O15126 338 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 IDH3BO43837 385 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 ZNF37AP17032 561 aaPredicted RBP10.81□□□□□ -0.68
CLN8-201ENST00000331222 TRIM16LQ309B1 348 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 SPOCD1Q6ZMY3 1216 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 PIGKQ92643 395 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 NMD3Q96D46 503 aaKnown RBP10.81□□□□□ -0.68
CLN8-201ENST00000331222 FAM120BQ96EK7 910 aaKnown RBP10.81□□□□□ -0.68
CLN8-201ENST00000331222 CHKBQ9Y259 395 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 GJB6O95452 261 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 ICAM1P05362 532 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 PSMC3P17980 439 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 CYP2A7P20853 494 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 PPP2R1BP30154 601 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 ABCG1P45844 678 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 THOP1P52888 689 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 ITPK1Q13572 414 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 GPAT3Q53EU6 434 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 KLHDC7AQ5VTJ3 777 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 ELMO1Q92556 727 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 AASDHPPTQ9NRN7 309 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 TNFSF13BQ9Y275 285 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 CDK12Q9NYV4 1490 aaPredicted RBP10.81□□□□□ -0.68
CLN8-201ENST00000331222 ITSN1Q15811 1721 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 INPP4BO15327 924 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 ATG7O95352 703 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 FAAH2Q6GMR7 532 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 FAM171BQ6P995 826 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 DNAJC9Q8WXX5 260 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 AKAP7Q9P0M2 348 aaPredicted RBP10.81□□□□□ -0.68
CLN8-201ENST00000331222 IQSEC2Q5JU85 1478 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 HS6ST1O60243 411 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 ZNF862O60290 1169 aa10.81□□□□□ -0.68
CLN8-201ENST00000331222 OR10H2O60403 315 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms