RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CMASQ8NFW8 434 aaPredicted RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 CERKQ8TCT0 537 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 DQX1Q8TE96 717 aaKnown RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 VPS50Q96JG6 964 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 PPP1R1BQ9UD71 204 aaPredicted RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 CNOT11Q9UKZ1 510 aaKnown RBP13.16□□□□□ -0.3
CCDC60-201ENST00000327554 CNTNAP2Q9UHC6 1331 aa13.16□□□□□ -0.3
CCDC60-201ENST00000327554 SCN4AP35499 1836 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 AIM2O14862 343 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 XPO1O14980 1071 aaKnown RBP13.15□□□□□ -0.3
CCDC60-201ENST00000327554 STAM2O75886 525 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 H6PDO95479 791 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 TFPTP0C1Z6 253 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 ACOT2P49753 483 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 NUMBP49757 651 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 NUDT2P50583 147 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 NDST2P52849 883 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 NUP107P57740 925 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 SLC10A2Q12908 348 aaPredicted RBP13.15□□□□□ -0.3
CCDC60-201ENST00000327554 SPIDRQ14159 915 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 FSCBQ5H9T9 825 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 PRR5LQ6MZQ0 368 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 GPAT2Q6NUI2 795 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 KCTD6Q8NC69 237 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 BHLHE22Q8NFJ8 381 aaPredicted RBP13.15□□□□□ -0.3
CCDC60-201ENST00000327554 GSDMBQ8TAX9 411 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 ABHD8Q96I13 439 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 SERPINI1Q99574 410 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 CORO1BQ9BR76 489 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 COA1Q9GZY4 146 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 MAN1C1Q9NR34 630 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 ANKEF1Q9NU02 776 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 COL20A1Q9P218 1284 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 PAK5Q9P286 719 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 EPS15L1Q9UBC2 864 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 PCSK1NQ9UHG2 260 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 VPS28Q9UK41 221 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 SQORQ9Y6N5 450 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 TANC1Q9C0D5 1861 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 H3BNH8 94 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 KLHL41O60662 606 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 GLRA3O75311 464 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 ALDOAP04075 364 aaKnown RBP13.15□□□□□ -0.3
CCDC60-201ENST00000327554 PTPN1P18031 435 aaKnown RBP13.15□□□□□ -0.3
CCDC60-201ENST00000327554 GRK2P25098 689 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 CDH5P33151 784 aaPredicted RBP13.15□□□□□ -0.3
CCDC60-201ENST00000327554 ABCE1P61221 599 aaKnown RBP13.15□□□□□ -0.3
CCDC60-201ENST00000327554 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 CEACAM7Q14002 265 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 PDE1CQ14123 709 aaPredicted RBP13.15□□□□□ -0.3
CCDC60-201ENST00000327554 PPP2R5DQ14738 602 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 GRAMD4Q6IC98 578 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 EPGNQ6UW88 154 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 CARM1Q86X55 608 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 SLC15A3Q8IY34 581 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 MPP5Q8N3R9 675 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 TRPC4APQ8TEL6 797 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 COX4I2Q96KJ9 171 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 SIGLEC10Q96LC7 697 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 KLHL32Q96NJ5 620 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 CDRT15Q96T59 188 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 GCOM2Q9BZD3 368 aaPredicted RBP13.15□□□□□ -0.3
CCDC60-201ENST00000327554 SDCBP2Q9H190 292 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 IGSF9Q9P2J2 1179 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 TJP2Q9UDY2 1190 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 CROCCQ5TZA2 2017 aa13.15□□□□□ -0.3
CCDC60-201ENST00000327554 GPR25O00155 361 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 RNASEH2AO75792 299 aaKnown RBP13.14□□□□□ -0.31
CCDC60-201ENST00000327554 NELFEP18615 380 aaKnown RBP13.14□□□□□ -0.31
CCDC60-201ENST00000327554 HOXD12P35452 270 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 MAGEA3P43357 314 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 MAGEA6P43360 314 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 CRKP46108 304 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 PSMD7P51665 324 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 MGAT5BQ3V5L5 792 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 SLC9B1Q4ZJI4 515 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 BNC2Q6ZN30 1099 aaPredicted RBP13.14□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF534Q76KX8 674 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 NIPA1Q7RTP0 329 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 DSELQ8IZU8 1212 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 LRRC39Q96DD0 335 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 CALN1Q9BXU9 219 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF518BQ9C0D4 1074 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 COG4Q9H9E3 785 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 RBM47A0AV96 593 aaKnown RBP13.14□□□□□ -0.31
CCDC60-201ENST00000327554 KRT3P12035 628 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF24P17028 368 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 GLDCP23378 1020 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 HALP42357 657 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 CTBSQ01459 385 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 PTPN20Q4JDL3 420 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 PPP6R3Q5H9R7 873 aaPredicted RBP13.14□□□□□ -0.31
CCDC60-201ENST00000327554 PPM1LQ5SGD2 360 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 ITPRIPL1Q6GPH6 555 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 C16orf89Q6UX73 402 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 PTF1AQ7RTS3 328 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 EMC1Q8N766 993 aa13.14□□□□□ -0.31
CCDC60-201ENST00000327554 KYQ8NBH2 561 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms