RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TAC4Q86UU9 113 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 ZDHHC14Q8IZN3 488 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 CCDC185Q8N715 623 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 PDZD8Q8NEN9 1154 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 GIPC2Q8TF65 315 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 MAIP1Q8WWC4 291 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 RNF25Q96BH1 459 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-202ENST00000324340 SGSM3Q96HU1 749 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 HERPUD2Q9BSE4 406 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 ENTPD7Q9NQZ7 604 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 KLHL11Q9NVR0 708 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 FBXW11Q9UKB1 542 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 FZD10Q9ULW2 581 aa13.23□□□□□ -0.29
DDX39A-202ENST00000324340 HIDE1A8MVS5 230 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 PI4K2BG5E9Z4 385 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 PRRG1O14668 218 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 GRM6O15303 877 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 IRAK2O43187 625 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 RALAP11233 206 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 GBP1P32455 592 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 VEPH1Q14D04 833 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 MAP7D3Q8IWC1 876 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 PARP9Q8IXQ6 854 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 C12orf50Q8NA57 414 aaPredicted RBP13.22□□□□□ -0.29
DDX39A-202ENST00000324340 KCTD6Q8NC69 237 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 HSPH1Q92598 858 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 ACSF2Q96CM8 615 aaPredicted RBP13.22□□□□□ -0.29
DDX39A-202ENST00000324340 AP1M1Q9BXS5 423 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 PBX4Q9BYU1 374 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 PLEKHA4Q9H4M7 779 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 OLA1Q9NTK5 396 aaKnown RBP13.22□□□□□ -0.29
DDX39A-202ENST00000324340 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.22□□□□□ -0.29
DDX39A-202ENST00000324340 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.22□□□□□ -0.297e-9■□□□□ 9.8
DDX39A-202ENST00000324340 DDIT4Q9NX09 232 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 NR2E1Q9Y466 385 aa13.22□□□□□ -0.29
DDX39A-202ENST00000324340 GOLGA6L10A0A0M3HER8 536 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 TCRBV7S2A1N4TA0A589 114 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 H0YGN5 161 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 LIN7AO14910 233 aaPredicted RBP13.21□□□□□ -0.29
DDX39A-202ENST00000324340 CD48P09326 243 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 IL4RP24394 825 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 L1CAMP32004 1257 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 LSP1P33241 339 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 ADRA1BP35368 520 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 PBX2P40425 430 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 PPP3CCP48454 512 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 CDH6P55285 790 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 TWF1Q12792 350 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 NME3Q13232 169 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 DPYSL3Q14195 570 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 RAB30Q15771 203 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 CA9Q16790 459 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 ODF2Q5BJF6 829 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 ZC3H12AQ5D1E8 599 aaKnown RBP13.21□□□□□ -0.29
DDX39A-202ENST00000324340 ZFYVE27Q5T4F4 411 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 PLPP4Q5VZY2 271 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 CCDC149Q6ZUS6 474 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 FAM131BQ86XD5 332 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 APLFQ8IW19 511 aaPredicted RBP13.21□□□□□ -0.29
DDX39A-202ENST00000324340 PRELID2Q8N945 189 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 ADAM32Q8TC27 787 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 ZNF473Q8WTR7 871 aaKnown RBP13.21□□□□□ -0.29
DDX39A-202ENST00000324340 RNF139Q8WU17 664 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 CASP10Q92851 521 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 PSMG2Q969U7 264 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 FAF2Q96CS3 445 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 ANKRD27Q96NW4 1050 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 ZNF670Q9BS34 389 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 PCDH18Q9HCL0 1135 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 SLC40A1Q9NP59 571 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 MTMR10Q9NXD2 777 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 ARHGEF38Q9NXL2 777 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.291e-6■■■■□ 20.4
DDX39A-202ENST00000324340 MTUS1Q9ULD2 1270 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 AP4E1Q9UPM8 1137 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 ASB3Q9Y575 518 aa13.21□□□□□ -0.29
DDX39A-202ENST00000324340 MTCL1Q9Y4B5 1905 aaKnown RBP13.21□□□□□ -0.29
DDX39A-202ENST00000324340 I6L893 689 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-202ENST00000324340 DNAJC8O75937 253 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-202ENST00000324340 TJP3O95049 919 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 GLUD1P00367 558 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 RARGP13631 454 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 KRT10P13645 584 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 KLRC2P26717 231 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 CA8P35219 290 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 IRS1P35568 1242 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 TUBP50607 506 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 CLCN4P51793 760 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 EPHB3P54753 998 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 SARNPP82979 210 aaKnown RBP13.2□□□□□ -0.3
DDX39A-202ENST00000324340 ADCY2Q08462 1091 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 XRCC4Q13426 336 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 GPM6BQ13491 265 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 RIPK1Q13546 671 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 BRMS1LQ5PSV4 323 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 KLHDC10Q6PID8 442 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 LRIG3Q6UXM1 1119 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 CCDC121Q6ZUS5 278 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 BBS12Q6ZW61 710 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 SND1Q7KZF4 910 aaKnown RBP eCLIP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms