RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 COLGALT1Q8NBJ5 622 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 ZSCAN18Q8TBC5 510 aaPredicted RBP15.69■□□□□ 0.1
VARS2-201ENST00000321897 WDR60Q8WVS4 1066 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 CYGBQ8WWM9 190 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 ECSITQ9BQ95 431 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 CHST12Q9NRB3 414 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.69■□□□□ 0.13e-6■□□□□ 10
VARS2-201ENST00000321897 ARHGAP28Q9P2N2 729 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 CPSF3Q9UKF6 684 aaKnown RBP15.69■□□□□ 0.1
VARS2-201ENST00000321897 GPR25O00155 361 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 ERVK-10P10266 1014 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 TGM2P21980 687 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 FGFR3P22607 806 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 MAP4P27816 1152 aaKnown RBP15.69■□□□□ 0.1
VARS2-201ENST00000321897 TBL3Q12788 808 aaKnown RBP15.69■□□□□ 0.1
VARS2-201ENST00000321897 LAMC2Q13753 1193 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 KIAA1841Q6NSI8 718 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 ACAD11Q709F0 780 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 C2orf69Q8N8R5 385 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 NLGN2Q8NFZ4 835 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 TFB1MQ8WVM0 346 aaKnown RBP15.69■□□□□ 0.1
VARS2-201ENST00000321897 TRAPPC9Q96Q05 1148 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 ABI2Q9NYB9 513 aaPredicted RBP15.69■□□□□ 0.1
VARS2-201ENST00000321897 SOX13Q9UN79 622 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 TMEM191CA6NGB0 347 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 CYB561D2O14569 222 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 LRCH4O75427 683 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 RECQL4O94761 1208 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 VNN1O95497 513 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 SLC25A27O95847 323 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 ERBB2P04626 1255 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 LGALS2P05162 132 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 ARF4P18085 180 aaPredicted RBP15.69■□□□□ 0.1
VARS2-201ENST00000321897 ECHS1P30084 290 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 ABL2P42684 1182 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 TUBP50607 506 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 RTP1P59025 263 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 FKBP1AP62942 108 aaKnown RBP15.69■□□□□ 0.1
VARS2-201ENST00000321897 POU6F1Q14863 301 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 LIN52Q52LA3 116 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 TTC39BQ5VTQ0 682 aaPredicted RBP15.69■□□□□ 0.1
VARS2-201ENST00000321897 FKBP1CQ5VVH2 108 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 ZPBP2Q6X784 338 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 OR6Y1Q8NGX8 325 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 PREBQ9HCU5 417 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 CYLDQ9NQC7 956 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 SAR1AQ9NR31 198 aa15.69■□□□□ 0.1
VARS2-201ENST00000321897 BARX2Q9UMQ3 279 aaPredicted RBP15.69■□□□□ 0.1
VARS2-201ENST00000321897 PLK1P53350 603 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 PLOD1Q02809 727 aaPredicted RBP15.68■□□□□ 0.1
VARS2-201ENST00000321897 GRIK4Q16099 956 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 DGKDQ16760 1214 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 CMTM5Q96DZ9 223 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 ZNF560Q96MR9 790 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 HERPUD2Q9BSE4 406 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 FAM192AQ9GZU8 254 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 MAN1C1Q9NR34 630 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 SNX13Q9Y5W8 968 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 HCRTO43612 131 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 STX1BP61266 288 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 PPP1R26Q5T8A7 1209 aaPredicted RBP15.68■□□□□ 0.1
VARS2-201ENST00000321897 NOTUMQ6P988 496 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 LRRC8BQ6P9F7 803 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 LPCAT2Q7L5N7 544 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 SLC26A11Q86WA9 606 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 SPATA6LQ8N4H0 392 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 DNERQ8NFT8 737 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 CATSPER2Q96P56 530 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 SNRNP25Q9BV90 132 aaKnown RBP15.68■□□□□ 0.1
VARS2-201ENST00000321897 COPS7BQ9H9Q2 264 aaPredicted RBP15.68■□□□□ 0.1
VARS2-201ENST00000321897 ETNK2Q9NVF9 386 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 SHOC2Q9UQ13 582 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 MTHFD1LQ6UB35 978 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 PGLYRP2Q96PD5 576 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 SEMA6AQ9H2E6 1030 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 MAP3K20Q9NYL2 800 aaKnown RBP15.68■□□□□ 0.1
VARS2-201ENST00000321897 SLIT2O94813 1529 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 LIN7AO14910 233 aaPredicted RBP15.68■□□□□ 0.1
VARS2-201ENST00000321897 ATICP31939 592 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 SKIV2L2P42285 1042 aaKnown RBP15.68■□□□□ 0.1
VARS2-201ENST00000321897 BST1Q10588 318 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 PEX6Q13608 980 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 PDK3Q15120 406 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 FBXO47Q5MNV8 452 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 KLC3Q6P597 504 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 TLDC1Q6P9B6 456 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 RBM15BQ8NDT2 890 aaKnown RBP15.68■□□□□ 0.1
VARS2-201ENST00000321897 TUBGCP5Q96RT8 1024 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 FIZ1Q96SL8 496 aa15.68■□□□□ 0.1
VARS2-201ENST00000321897 PRR5-ARHGAP8B1AHC4 643 aa15.67■□□□□ 0.1
VARS2-201ENST00000321897 BUD23O43709 281 aaKnown RBP15.67■□□□□ 0.1
VARS2-201ENST00000321897 TAF6P49848 677 aa15.67■□□□□ 0.1
VARS2-201ENST00000321897 ARHGAP8P85298 464 aa15.67■□□□□ 0.1
VARS2-201ENST00000321897 GBE1Q04446 702 aa15.67■□□□□ 0.1
VARS2-201ENST00000321897 ZBTB17Q13105 803 aa15.67■□□□□ 0.1
VARS2-201ENST00000321897 SPDYCQ5MJ68 293 aa15.67■□□□□ 0.1
VARS2-201ENST00000321897 FNBP1LQ5T0N5 605 aa15.67■□□□□ 0.1
VARS2-201ENST00000321897 TMEM63BQ5T3F8 832 aa15.67■□□□□ 0.1
VARS2-201ENST00000321897 RINLQ6ZS11 566 aa15.67■□□□□ 0.1
VARS2-201ENST00000321897 MON1BQ7L1V2 547 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms