RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 FAM72DQ6L9T8 149 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 BNIPLQ7Z465 357 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 RNF180Q86T96 592 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 FAM72BQ86X60 149 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 METTL23Q86XA0 190 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 PSTKQ8IV42 348 aaKnown RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 PGBD4Q96DM1 585 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 QKIQ96PU8 341 aaKnown RBP eCLIP7.82□□□□□ -1.163e-7■■■■■ 38.1
IFT88-201ENST00000319980 KLF6Q99612 283 aaPredicted RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 CEP41Q9BYV8 373 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 RASSF4Q9H2L5 321 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 ANLNQ9NQW6 1124 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.82□□□□□ -1.16
IFT88-201ENST00000319980 RCOR3Q9P2K3 495 aaPredicted RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 FETUBQ9UGM5 382 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 ZC3H7BQ9UGR2 993 aaKnown RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 PTCH2Q9Y6C5 1203 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 MAD1L1Q9Y6D9 718 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 I6L893 689 aaPredicted RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 EEF2KO00418 725 aaKnown RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 SNX3O60493 162 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 CAPN15O75808 1086 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 LTFP02788 710 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 AMHP03971 560 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 VAV1P15498 845 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 GBP2P32456 591 aaPredicted RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 ACLYP53396 1101 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 PTK7Q13308 1070 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 TUSC3Q13454 348 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 DSC3Q14574 896 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 RAB41Q5JT25 222 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 ANKRD20A2Q5SQ80 823 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 ANKRD20A1Q5TYW2 823 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 ANKRD20A3Q5VUR7 823 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 DENND5BQ6ZUT9 1274 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 RFX8Q6ZV50 586 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 BZW1Q7L1Q6 419 aaKnown RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 PRPF39Q86UA1 669 aaKnown RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 LRRTM3Q86VH5 581 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 CTAGE3PQ8IX95 158 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 TP53INP2Q8IXH6 220 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 DCAKDQ8WVC6 231 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 MAGEB18Q96M61 343 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 OLFM3Q96PB7 478 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 TMEM209Q96SK2 561 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 ACBD6Q9BR61 282 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 TRIM56Q9BRZ2 755 aaKnown RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 DHRS4Q9BTZ2 278 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 TMLHEQ9NVH6 421 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 SEPT10Q9P0V9 454 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 SMG5Q9UPR3 1016 aaKnown RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 ATXN2Q99700 1313 aaKnown RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 HHLA1C9JL84 531 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 PRPF4O43172 522 aaKnown RBP eCLIP7.82□□□□□ -1.16
IFT88-201ENST00000319980 DGKIO75912 1065 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 ASMTLO95671 621 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 INHBAP08476 426 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 CST5P28325 142 aaPredicted RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 IFRD2Q12894 506 aaPredicted RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 GRIK3Q13003 919 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 SPRED3Q2MJR0 410 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 OVOS1Q6IE37 1185 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 C4orf22Q6V702 233 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 FAM47EQ6ZV65 393 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 OR10T2Q8NGX3 314 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 RSPH1Q8WYR4 309 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 P2RY11Q96G91 374 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 GLT1D1Q96MS3 346 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 COLEC11Q9BWP8 271 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 FRMD8Q9BZ67 464 aaPredicted RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 TRPV6Q9H1D0 765 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 PRDM12Q9H4Q4 367 aa7.82□□□□□ -1.16
IFT88-201ENST00000319980 WDR6Q9NNW5 1121 aaKnown RBP7.82□□□□□ -1.16
IFT88-201ENST00000319980 KCNK1O00180 336 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 TYROBPO43914 113 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 TSHRP16473 764 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 FOXN2P32314 431 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 MAGEA6P43360 314 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 DNAJC3Q13217 504 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 SPARCL1Q14515 664 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 SLC1A5Q15758 541 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 INTS6LQ5JSJ4 861 aaKnown RBP7.81□□□□□ -1.16
IFT88-201ENST00000319980 BSPRYQ5W0U4 402 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 FAM171BQ6P995 826 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 CD300LGQ6UXG3 332 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 ECHDC2Q86YB7 292 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 MPP5Q8N3R9 675 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 PPM1NQ8N819 430 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 DENND1AQ8TEH3 1009 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 PPM1EQ8WY54 764 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 SLC9A7Q96T83 725 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 WDCPQ9H6R7 721 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 CSNK1G1Q9HCP0 422 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 PIH1D1Q9NWS0 290 aaKnown RBP7.81□□□□□ -1.16
IFT88-201ENST00000319980 GGT7Q9UJ14 662 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 A0A0A0MRY4 1105 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 H0YHG0 523 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 RNF103O00237 685 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 SPAG6O75602 509 aa7.81□□□□□ -1.16
IFT88-201ENST00000319980 FAM155BO75949 473 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms