RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 NCAPHQ15003 741 aa30.34■■■□□ 2.45
SYNGR1-202ENST00000318801 USP39Q53GS9 565 aaKnown RBP30.34■■■□□ 2.45
SYNGR1-202ENST00000318801 ZNF677Q86XU0 584 aa30.34■■■□□ 2.45
SYNGR1-202ENST00000318801 CHPFQ8IZ52 775 aa30.34■■■□□ 2.45
SYNGR1-202ENST00000318801 ZNF557Q8N988 423 aaPredicted RBP30.34■■■□□ 2.45
SYNGR1-202ENST00000318801 ZNF292O60281 2723 aa30.34■■■□□ 2.45
SYNGR1-202ENST00000318801 GVINP1Q7Z2Y8 2422 aa30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 ACSL4O60488 711 aa30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 TSPAN3O60637 253 aa30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 LSM8O95777 96 aaKnown RBP30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 SLC2A3P11169 496 aa30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 STAT1P42224 750 aa30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 FILIP1LQ4L180 1135 aa30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 SYPL2Q5VXT5 272 aa30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 CACNA2D4Q7Z3S7 1137 aa30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 CCDC117Q8IWD4 279 aaPredicted RBP30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 GANQ9H2C0 597 aa30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 NLRC4Q9NPP4 1024 aa30.33■■■□□ 2.45
SYNGR1-202ENST00000318801 SGK1O00141 431 aa30.32■■■□□ 2.44
SYNGR1-202ENST00000318801 NPC1O15118 1278 aa30.32■■■□□ 2.44
SYNGR1-202ENST00000318801 TIMM44O43615 452 aa30.32■■■□□ 2.44
SYNGR1-202ENST00000318801 TAF3Q5VWG9 929 aa30.32■■■□□ 2.44
SYNGR1-202ENST00000318801 ANO7Q6IWH7 933 aa30.32■■■□□ 2.44
SYNGR1-202ENST00000318801 ANKS1BQ7Z6G8 1248 aa30.32■■■□□ 2.44
SYNGR1-202ENST00000318801 ERICH1Q86X53 443 aa30.32■■■□□ 2.44
SYNGR1-202ENST00000318801 BCCIPQ9P287 314 aaKnown RBP eCLIP30.32■■■□□ 2.44
SYNGR1-202ENST00000318801 SIK3Q9Y2K2 1263 aa30.32■■■□□ 2.44
SYNGR1-202ENST00000318801 GFPT2O94808 682 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 TRUB2O95900 331 aaKnown RBP30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 SOX5P35711 763 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 SLC6A3Q01959 620 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 ARID5AQ03989 594 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 SRSF5Q13243 272 aaKnown RBP30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 LPAL2Q16609 132 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 MPP7Q5T2T1 576 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 C11orf74Q86VG3 221 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 ADAM32Q8TC27 787 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 RNF34Q969K3 372 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 C18orf8Q96DM3 657 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 ERGIC2Q96RQ1 377 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 FAM204AQ9H8W3 233 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 SLTMQ9NWH9 1034 aaKnown RBP eCLIP30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 GPR179Q6PRD1 2367 aa30.31■■■□□ 2.44
SYNGR1-202ENST00000318801 CDH5P33151 784 aaPredicted RBP30.3■■■□□ 2.44
SYNGR1-202ENST00000318801 KLK7P49862 253 aa30.3■■■□□ 2.44
SYNGR1-202ENST00000318801 TPM4P67936 248 aa30.3■■■□□ 2.44
SYNGR1-202ENST00000318801 MTA1Q13330 715 aa30.3■■■□□ 2.44
SYNGR1-202ENST00000318801 BYSLQ13895 437 aaKnown RBP30.3■■■□□ 2.44
SYNGR1-202ENST00000318801 EIF4HQ15056 248 aaKnown RBP30.3■■■□□ 2.44
SYNGR1-202ENST00000318801 TAC4Q86UU9 113 aa30.3■■■□□ 2.44
SYNGR1-202ENST00000318801 PGBD3Q8N328 593 aa30.3■■■□□ 2.44
SYNGR1-202ENST00000318801 TMEM51Q9NW97 253 aa30.3■■■□□ 2.44
SYNGR1-202ENST00000318801 CFAP54Q96N23 3096 aa30.3■■■□□ 2.44
SYNGR1-202ENST00000318801 PRRT4C9JH25 899 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 GFRA2O00451 464 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 RETP07949 1114 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 HOXB2P14652 356 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 TAF5Q15542 800 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 TMEM92Q6UXU6 159 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 FAM183BPQ6ZVS7 135 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 NOP9Q86U38 636 aaKnown RBP30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 DEFB106AQ8N104 65 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 EPS8L1Q8TE68 723 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 SLC39A13Q96H72 371 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 FCRL2Q96LA5 508 aaPredicted RBP30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 RRN3Q9NYV6 651 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 TJP2Q9UDY2 1190 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 SPAG17Q6Q759 2223 aa30.29■■■□□ 2.44
SYNGR1-202ENST00000318801 ERBB2P04626 1255 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 CCDC172P0C7W6 258 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 HNRNPLP14866 589 aaKnown RBP eCLIP30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 HOXC13P31276 330 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 SKOR2Q2VWA4 1001 aaPredicted RBP30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 PTPN20Q4JDL3 420 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 PIK3R6Q5UE93 754 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 EGFLAMQ63HQ2 1017 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 SLC26A9Q7LBE3 791 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 RASSF3Q86WH2 238 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 ATP6V0D2Q8N8Y2 350 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 HJURPQ8NCD3 748 aaPredicted RBP30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 DDX1Q92499 740 aaKnown RBP30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 BTN2A3PQ96KV6 586 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 SLC2A13Q96QE2 648 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 ZDHHC4Q9NPG8 344 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 DDIT4Q9NX09 232 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 ANTXRLA6NF34 631 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 ADAM23O75077 832 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 GRAP2O75791 330 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 MOCS2O96007 188 aaPredicted RBP30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 ATP1A3P13637 1013 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 ABCB4P21439 1286 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 HOXD9P28356 352 aaPredicted RBP30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 CCR1P32246 355 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 NOS2P35228 1153 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 JAM2P57087 298 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 ELF2Q15723 593 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 OLFML1Q6UWY5 402 aa30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 PIWIL1Q96J94 861 aaKnown RBP30.28■■■□□ 2.44
SYNGR1-202ENST00000318801 HSD3B7Q9H2F3 369 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms