RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ARHGAP42A6NI28 874 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 INO80B-WBP1J3KQ70 363 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 GPR25O00155 361 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 LGR5O75473 907 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 TGFB3P10600 412 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 MLNP12872 115 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 CYP2F1P24903 491 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 GRIA1P42261 906 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 PDE1CQ14123 709 aaPredicted RBP19.69■□□□□ 0.74
RTN4-201ENST00000317610 RALGPS1Q5JS13 557 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 C16orf46Q6P387 395 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 CCDC33Q8N5R6 958 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 AFG1LQ8WV93 481 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 PYDC1Q8WXC3 89 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 QKIQ96PU8 341 aaKnown RBP eCLIP19.69■□□□□ 0.742e-7■■■■■ 69
RTN4-201ENST00000317610 SORT1Q99523 831 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 CENPKQ9BS16 269 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 INO80BQ9C086 356 aaPredicted RBP19.69■□□□□ 0.74
RTN4-201ENST00000317610 ZNF195O14628 629 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 PRKCGP05129 697 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 GRK2P25098 689 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 IDH3AP50213 366 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 NDST1P52848 882 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 IRX4P78413 519 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 ASPHQ12797 758 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 SLC10A2Q12908 348 aaPredicted RBP19.69■□□□□ 0.74
RTN4-201ENST00000317610 MSLNQ13421 630 aaPredicted RBP19.69■□□□□ 0.74
RTN4-201ENST00000317610 NAB1Q13506 487 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 GRM2Q14416 872 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 SFT2D3Q587I9 215 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 DENND5BQ6ZUT9 1274 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 RASSF3Q86WH2 238 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 ST13P4Q8IZP2 240 aaPredicted RBP19.69■□□□□ 0.74
RTN4-201ENST00000317610 OLFM3Q96PB7 478 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 WRNIP1Q96S55 665 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 DCDC2Q9UHG0 476 aa19.69■□□□□ 0.74
RTN4-201ENST00000317610 TPP1O14773 563 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 UQCRBP14927 111 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 ADORA2AP29274 412 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 SDC4P31431 198 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 NR2C2P49116 596 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 PACS1Q6VY07 963 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 ATG14Q6ZNE5 492 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 POU5F2Q8N7G0 328 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 HPDLQ96IR7 371 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 NLRP4Q96MN2 994 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 GORASP1Q9BQQ3 440 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 KLHL4Q9C0H6 718 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 XPNPEP3Q9NQH7 507 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 CDH22Q9UJ99 828 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 ADAMTS6Q9UKP5 1117 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 PROCP04070 461 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 STAG3L1P0CL83 205 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 ZFXP17010 805 aaPredicted RBP19.68■□□□□ 0.74
RTN4-201ENST00000317610 HDAC4P56524 1084 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 GBE1Q04446 702 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 STILQ15468 1287 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 DPYSL2Q16555 572 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 INSCQ1MX18 579 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 DPH6Q7L8W6 267 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 ASB7Q9H672 318 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 BTBD7Q9P203 1132 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 GTF2IRD1Q9UHL9 959 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 HACL1Q9UJ83 578 aa19.68■□□□□ 0.74
RTN4-201ENST00000317610 SF3B1O75533 1304 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■■■■■ 75.3
RTN4-201ENST00000317610 CASQ2O14958 399 aaPredicted RBP19.67■□□□□ 0.74
RTN4-201ENST00000317610 STAU1O95793 577 aaKnown RBP19.67■□□□□ 0.74
RTN4-201ENST00000317610 KCNA4P22459 653 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 HARS2P49590 506 aaKnown RBP19.67■□□□□ 0.74
RTN4-201ENST00000317610 SLC6A3Q01959 620 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 TMEM132AQ24JP5 1023 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 PKDCCQ504Y2 493 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 UNC5BQ8IZJ1 945 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 TTC39CQ8N584 583 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 ATP2A3Q93084 1043 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 CMTM5Q96DZ9 223 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 SLC4A5Q9BY07 1137 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 MINDY3Q9H8M7 445 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 MORF4L1Q9UBU8 362 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 WDR27A2RRH5 827 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 SOWAHBA6NEL2 793 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 PRDX6P30041 224 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 RPS6KA3P51812 740 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 MED21Q13503 144 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 CUL3Q13618 768 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 GOLGA7BQ2TAP0 167 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 RASIP1Q5U651 963 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 PLPPR4Q7Z2D5 763 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 TRIM50Q86XT4 487 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 SLC26A7Q8TE54 656 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 PPP4R1Q8TF05 950 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 HAPLN3Q96S86 360 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 GPR20Q99678 358 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 PNPOQ9NVS9 261 aa19.67■□□□□ 0.74
RTN4-201ENST00000317610 GJB1P08034 283 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 PABPC4LP0CB38 370 aaKnown RBP19.66■□□□□ 0.74
RTN4-201ENST00000317610 MCF2P10911 925 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 ITGAXP20702 1163 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 ARRB2P32121 409 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 RGS7P49802 495 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms