RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 GRM5P41594 1212 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 SP3Q02447 781 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 KBTBD12Q3ZCT8 623 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 NOTUMQ6P988 496 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 IGDCC3Q8IVU1 814 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 WDTC1Q8N5D0 677 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 MTBPQ96DY7 904 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 EBF3Q9H4W6 596 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 TJP2Q9UDY2 1190 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 MARCOQ9UEW3 520 aaPredicted RBP17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 E7ESA3 106 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 KITP10721 976 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 GJA9P57773 515 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 SLC18A2Q05940 514 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 NOGQ13253 232 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 HSF5Q4G112 596 aaPredicted RBP17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 DNAJC24Q6P3W2 148 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 CDHR3Q6ZTQ4 885 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 RAPH1Q70E73 1250 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 PRPF39Q86UA1 669 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 RSAD2Q8WXG1 361 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 PPP2R3CQ969Q6 453 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 GOLGA2P5Q9HBQ8 144 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 KCNK4Q9NYG8 393 aa17.76■□□□□ 0.43
SCAMP4-201ENST00000316097 CCDC195A0A1B0GUA6 201 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 I3L4J1 428 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 RECQL4O94761 1208 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 ASGR1P07306 291 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 BASP1P80723 227 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 IRF5Q13568 498 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 LRRC38Q5VT99 294 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 FAM81AQ8TBF8 368 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 KATNAL1Q9BW62 490 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 ZNF395Q9H8N7 513 aaPredicted RBP17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 XPNPEP3Q9NQH7 507 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 TAGLN3Q9UI15 199 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 TCRBV9S1A1TA0A576 114 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 MEIS3P2A8K0S8 358 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 COPEO14579 308 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 SEPT4O43236 478 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 TOMM70O94826 608 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 MMP8P22894 467 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 ELK3P41970 407 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 KCNA10Q16322 511 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 LRRC36Q1X8D7 754 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 SMTNL2Q2TAL5 461 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 SYCP2LQ5T4T6 812 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 CYP4A22Q5TCH4 519 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 DENND1BQ6P3S1 775 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 SH2D5Q6ZV89 423 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 ARRDC4Q8NCT1 418 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 CD99L2Q8TCZ2 262 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 NCSTNQ92542 709 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 DTNBP1Q96EV8 351 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 SRPK1Q96SB4 655 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 ELOVL4Q9GZR5 314 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 IL1BP01584 269 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 PTPN7P35236 360 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 ALDH18A1P54886 795 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 YWHAGP61981 247 aaKnown RBP eCLIP17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 TMPRSS15P98073 1019 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 BST1Q10588 318 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 DNAL1Q4LDG9 190 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 MARK2Q7KZI7 788 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 ST13P4Q8IZP2 240 aaPredicted RBP17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 SHKBP1Q8TBC3 707 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 SLC44A1Q8WWI5 657 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 MTG1Q9BT17 334 aaPredicted RBP17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 CACNG4Q9UBN1 327 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 CYTH4Q9UIA0 394 aa17.75■□□□□ 0.43
SCAMP4-201ENST00000316097 MEI4A8MW99 385 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 KBTBD13C9JR72 458 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 HCRTO43612 131 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 CST8O60676 142 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 OPHN1O60890 802 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 FAM155BO75949 473 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 IGFBP6P24592 240 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 NRLP54845 237 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 UBXN11Q5T124 520 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 FAM43BQ6ZT52 329 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 HHIPL1Q96JK4 782 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 LPIN3Q9BQK8 851 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 CCDC28BQ9BUN5 200 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 BCO2Q9BYV7 579 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 ALDH1A1P00352 501 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 RASSF3Q86WH2 238 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 UNC45BQ8IWX7 931 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 C12orf29Q8N999 325 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 SLC4A11Q8NBS3 891 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 SNX27Q96L92 541 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 WWP1Q9H0M0 922 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 ZWILCHQ9H900 591 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 DDX56Q9NY93 547 aaKnown RBP17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 GTF2IRD1Q9UHL9 959 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 SLC4A7Q9Y6M7 1214 aa17.74■□□□□ 0.43
SCAMP4-201ENST00000316097 PRR5-ARHGAP8B1AHC4 643 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 PIK3R2O00459 728 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 KLF11O14901 512 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 BUD23O43709 281 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 CREB3O43889 395 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms