RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 HVCN1Q96D96 273 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 PRR11Q96HE9 360 aaPredicted RBP4.52□□□□□ -1.69
SMCO3-201ENST00000316048 PRAM1Q96QH2 718 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 HERC2P3Q9BVR0 1158 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 PLEKHA2Q9HB19 425 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 INTS13Q9NVM9 706 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ASAP1Q9ULH1 1129 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 RRP7AQ9Y3A4 280 aaKnown RBP4.52□□□□□ -1.69
SMCO3-201ENST00000316048 SCINQ9Y6U3 715 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 NINLQ9Y2I6 1382 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 SMG6Q86US8 1419 aaKnown RBP4.52□□□□□ -1.69
SMCO3-201ENST00000316048 MYO5BQ9ULV0 1848 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 TRGV11A0A075B6L2 103 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 LPXNO60711 386 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 WDR47O94967 919 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 HLA-DOAP06340 250 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 KRT9P35527 623 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 LIPAP38571 399 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 MTHFSP49914 203 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 RBM5P52756 815 aaKnown RBP eCLIP4.52□□□□□ -1.69
SMCO3-201ENST00000316048 BFSP2Q13515 415 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ZNF585AQ6P3V2 769 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 TRABD2AQ86V40 505 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 SYNE4Q8N205 404 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ZUFSPQ96AP4 578 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 CCDC134Q9H6E4 229 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 CD248Q9HCU0 757 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 DKK3Q9UBP4 350 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ST6GALNAC2Q9UJ37 374 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 SLC13A4Q9UKG4 626 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 RAB21Q9UL25 225 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ARHGAP26Q9UNA1 814 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 TMEM98Q9Y2Y6 226 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 NOX1Q9Y5S8 564 aa4.52□□□□□ -1.69
SMCO3-201ENST00000316048 ALKQ9UM73 1620 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 MYOM1P52179 1685 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 ABCC11Q96J66 1382 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 LOC105369274A0A096LPK9 316 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 LOC102723532A0A0G2JNH3 316 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 A1L4Q6 167 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 AGAP5A6NIR3 686 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 CTIFO43310 598 aaKnown RBP4.51□□□□□ -1.69
SMCO3-201ENST00000316048 RNASEH2AO75792 299 aaKnown RBP4.51□□□□□ -1.69
SMCO3-201ENST00000316048 CDKL5O76039 1030 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 SPDEFO95238 335 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 DEUP1Q05D60 604 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 AASDHQ4L235 1098 aaPredicted RBP4.51□□□□□ -1.69
SMCO3-201ENST00000316048 CCDC30Q5VVM6 783 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 ATG16L1Q676U5 607 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 ANKRD40Q6AI12 368 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 DGAT2L7PQ6IED9 249 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 C16orf89Q6UX73 402 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 OR4N4Q8N0Y3 316 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 TCP11L2Q8N4U5 519 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 ST8SIA4Q92187 359 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 STAMQ92783 540 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 FAM89AQ96GI7 184 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 REEP2Q9BRK0 252 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 NUDT22Q9BRQ3 303 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 TTPALQ9BTX7 342 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 NDUFAF4Q9P032 175 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 HSF4Q9ULV5 492 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 DERAQ9Y315 318 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 PCDHB2Q9Y5E7 798 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 NSD2O96028 1365 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 ANKRD36BQ8N2N9 1353 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 CYP27B1O15528 508 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 CSF1P09603 554 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 CPA1P15085 419 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 MAN1A1P33908 653 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 MCM5P33992 734 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 THBS4P35443 961 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 FZD5Q13467 585 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 TDGQ13569 410 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 TP53BP2Q13625 1128 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 TOMM20Q15388 145 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 SF3B3Q15393 1217 aaKnown RBP4.51□□□□□ -1.69
SMCO3-201ENST00000316048 FAM90A2PQ658T7 463 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 SP5Q6BEB4 398 aaPredicted RBP4.51□□□□□ -1.69
SMCO3-201ENST00000316048 KIAA1324Q6UXG2 1013 aaKnown RBP4.51□□□□□ -1.69
SMCO3-201ENST00000316048 BBS12Q6ZW61 710 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 NGEFQ8N5V2 710 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 B3GALNT2Q8NCR0 500 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 UCMAQ8WVF2 138 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 NPIPB3Q92617 1050 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 CFAP53Q96M91 514 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 NEUROD6Q96NK8 337 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 TOX2Q96NM4 488 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 BARD1Q99728 777 aaKnown RBP4.51□□□□□ -1.69
SMCO3-201ENST00000316048 CDK19Q9BWU1 502 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 PAIP1Q9H074 479 aaKnown RBP4.51□□□□□ -1.69
SMCO3-201ENST00000316048 UNC45AQ9H3U1 944 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 GLOD4Q9HC38 313 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 GALNT9Q9HCQ5 603 aa4.51□□□□□ -1.69
SMCO3-201ENST00000316048 TRPC5Q9UL62 973 aaPredicted RBP4.51□□□□□ -1.69
SMCO3-201ENST00000316048 ARHGEF28Q8N1W1 1705 aaKnown RBP4.51□□□□□ -1.69
SMCO3-201ENST00000316048 NSD3Q9BZ95 1437 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 NLRP1Q9C000 1473 aa4.5□□□□□ -1.69
SMCO3-201ENST00000316048 TMEM2Q9UHN6 1383 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms