RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ZC3H12AQ5D1E8 599 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 SPOCD1Q6ZMY3 1216 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 NPAS4Q8IUM7 802 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 C10orf53Q8N6V4 93 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 SGF29Q96ES7 293 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 PACSIN1Q9BY11 444 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 ANGPTL2Q9UKU9 493 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 SMAPO00193 183 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 HSPA9P38646 679 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 MMP13P45452 471 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 PMS1P54277 932 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 DLG4P78352 724 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 DET1Q7L5Y6 550 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 WDR24Q96S15 920 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 MRFAP1Q9Y605 127 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 CAPZA2P47755 286 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 STX3Q13277 289 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 GPM6BQ13491 265 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 C9orf57Q5W0N0 161 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 C4orf33Q8N1A6 199 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 ZNF614Q8N883 585 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 RPN2P04844 631 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 OR56A5P0C7T3 313 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 NCKAP1LP55160 1127 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 SEC13P55735 322 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 ABHD15Q6UXT9 468 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 VPS37AQ8NEZ2 397 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 HAS1Q92839 578 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 PAWRQ96IZ0 340 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 ZNF510Q9Y2H8 683 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 PCDHA2Q9Y5H9 948 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 F8VP50 259 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 GRAMD1BQ3KR37 738 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 SH3BP5LQ7L8J4 393 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 SLC13A5Q86YT5 568 aaPredicted RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 MCOLN2Q8IZK6 566 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 PRMT1Q99873 361 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 FAM167BQ9BTA0 163 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 RIC8BQ9NVN3 520 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 RNF186Q9NXI6 227 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 CLDND1Q9NY35 253 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 OR6C75A6NL08 312 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 GZMAP12544 262 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 CYP2A7P20853 494 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 SOX11P35716 441 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 ACLYP53396 1101 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 CUL3Q13618 768 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 RAET1GQ6H3X3 334 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 OTOAQ7RTW8 1153 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 FBXL16Q8N461 479 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 TC2NQ8N9U0 490 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 OSCP1Q8WVF1 389 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 ABCG4Q9H172 646 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 SEPT3Q9UH03 358 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 MYH13Q9UKX3 1938 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 SLIT2O94813 1529 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 NOS2P35228 1153 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 GRM5P41594 1212 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 KDSRQ06136 332 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 UNC93AQ86WB7 457 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 LENG9Q96B70 501 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 NAF1Q96HR8 494 aaKnown RBP10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 MYOCQ99972 504 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 PHRF1Q9P1Y6 1649 aaKnown RBP10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 GTPBP10A4D1E9 387 aaKnown RBP10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 TUSC3Q13454 348 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 GALNTL6Q49A17 601 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 KCNK18Q7Z418 384 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 RBM12Q9NTZ6 932 aaKnown RBP10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 MARCOQ9UEW3 520 aaPredicted RBP10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 LZTR1Q8N653 840 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 SPATA20Q8TB22 786 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 PIK3R5Q8WYR1 880 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 SYCE1LA8MT33 242 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 RAD51CO43502 376 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 SMAD3P84022 425 aaKnown RBP10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 SNCBQ16143 134 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 C1orf146Q5VVC0 180 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 DENND1BQ6P3S1 775 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 TMEM161BQ8NDZ6 487 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 GOLGA2P5Q9HBQ8 144 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 GRID1Q9ULK0 1009 aa10.98□□□□□ -0.65
SYNPO2-201ENST00000307142 ARVCFO00192 962 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 OPLAHO14841 1288 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 NR2C2P49116 596 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 PDE1CQ14123 709 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 UBXN2BQ14CS0 331 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 FAM46CQ5VWP2 391 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 STRA8Q7Z7C7 330 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 DNAAF5Q86Y56 855 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 MAGED4Q96JG8 741 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 SOWAHBA6NEL2 793 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 RASSF9O75901 435 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 PROSCO94903 275 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 TPH1P17752 444 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 GPR1P46091 355 aa10.97□□□□□ -0.65
SYNPO2-201ENST00000307142 CCNG1P51959 295 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms