RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 BROXQ5VW32 411 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF34Q8IZ26 560 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 NSMCE2Q96MF7 247 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 TMEM216Q9P0N5 145 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 RPS6KB2Q9UBS0 482 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 NDUFAF1Q9Y375 327 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ROR2Q01974 943 aaKnown RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 TBX2Q13207 712 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-201ENST00000302516 SQLEQ14534 574 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 MEA1Q16626 185 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ERMARDQ5T6L9 678 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ARMC6Q6NXE6 501 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 OOSP2Q86WS3 158 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 OMA1Q96E52 524 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 Q96MT0 163 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 ELOVL6Q9H5J4 265 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 PCYOX1Q9UHG3 505 aa7.83□□□□□ -1.16
SF3B3-201ENST00000302516 MAP2K7O14733 419 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 MSH4O15457 936 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 CLOCKO15516 846 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 NPY2RP49146 381 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 GCNT1Q02742 428 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 BST2Q10589 180 aaKnown RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 FUT11Q495W5 492 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 FBXO25Q8TCJ0 367 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 LENG1Q96BZ8 264 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 DUSP12Q9UNI6 340 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ASTN2O75129 1339 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 MEI4A8MW99 385 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 PLA2G6O60733 806 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 GSTT1P30711 240 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 SLC16A1P53985 500 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 IL5RAQ01344 420 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ATP1A4Q13733 1029 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 DPYSQ14117 519 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 C10orf120Q5SQS8 335 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 VAT1Q99536 393 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 MUC13Q9H3R2 512 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 KLHL28Q9NXS3 571 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 H3BMM5 538 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 H3BNX3 289 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 PAEPP09466 180 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 CD151P48509 253 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 OXCT1P55809 520 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 SNAPC2Q13487 334 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 KLHL17Q6TDP4 642 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 MPZL3Q6UWV2 235 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 MARK2Q7KZI7 788 aaKnown RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 TTC30AQ86WT1 665 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 HS6ST3Q8IZP7 471 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 TTC30BQ8N4P2 665 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 MOSPD2Q8NHP6 518 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 MAGEC3Q8TD91 643 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF75CPQ92670 426 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 RNFT2Q96EX2 444 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 QTRT2Q9H974 415 aaKnown RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 SLC25A13Q9UJS0 675 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 SQORQ9Y6N5 450 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 GOLGA4Q13439 2230 aaKnown RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 SNPHO15079 494 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 NR3C2P08235 984 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 PDGFRBP09619 1106 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 TPP2P29144 1249 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 GP5P40197 560 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 LHX1P48742 406 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ITGB3BPQ13352 177 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 GIT2Q14161 759 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 PGS1Q32NB8 556 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 HERC6Q8IVU3 1022 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 C8orf59Q8N0T1 100 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 USP33Q8TEY7 942 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 GNG14A0A1W2PPG7 69 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 RECQL5O94762 991 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 BAIAP3O94812 1187 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ATG7O95352 703 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ECDO95905 644 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 EPHB2P29323 1055 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 GRK4P32298 578 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ABRAQ8N0Z2 381 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 OR56A4Q8NGH8 313 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 OSBPL11Q9BXB4 747 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 SLITRK2Q9H156 845 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 RPS6KA6Q9UK32 745 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 STON1Q9Y6Q2 735 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 SYNDIG1LA6NDD5 238 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 RAD51BO15315 384 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 CCDC130P13994 396 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ALDH1A3P47895 512 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ARL4DP49703 201 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ALDH5A1P51649 535 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 BNIP2Q12982 314 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 SPP2Q13103 211 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF177Q13360 481 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 SCARF1Q14162 830 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 INO80DQ53TQ3 878 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ABRAXAS1Q6UWZ7 409 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF571Q7Z3V5 609 aaPredicted RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 KCNMB4Q86W47 210 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 FUKQ8N0W3 1084 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms