RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 LRRC38Q5VT99 294 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 MBLAC2Q68D91 279 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 ERI1Q8IV48 349 aaKnown RBP11.3□□□□□ -0.6
SNX20-201ENST00000300590 BBS5Q8N3I7 341 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 MAML3Q96JK9 1138 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 OR52B2Q96RD2 323 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 RIT2Q99578 217 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 NUF2Q9BZD4 464 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 ZNF696Q9H7X3 374 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 POPDC2Q9HBU9 364 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 RBAKQ9NYW8 714 aaPredicted RBP11.3□□□□□ -0.6
SNX20-201ENST00000300590 SORCS3Q9UPU3 1222 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 TSC22D4Q9Y3Q8 395 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 C4BPAP04003 597 aaKnown RBP11.3□□□□□ -0.6
SNX20-201ENST00000300590 KRT7P08729 469 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 CD151P48509 253 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 MTMR1Q13613 665 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 CES3Q6UWW8 571 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 PACS1Q6VY07 963 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 LDHDQ86WU2 507 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 ZNF781Q8N8C0 355 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 MAPK15Q8TD08 544 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 ATP6V1E2Q96A05 226 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 RCN3Q96D15 328 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 PGLYRP2Q96PD5 576 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 IMPG2Q9BZV3 1241 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 TRPV6Q9H1D0 765 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 DBNDD1Q9H9R9 158 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 C17orf75Q9HAS0 396 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 PLGRKTQ9HBL7 147 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNX20-201ENST00000300590 ADA2Q9NZK5 511 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 COL20A1Q9P218 1284 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 AGO2Q9UKV8 859 aaKnown RBP11.3□□□□□ -0.6
SNX20-201ENST00000300590 WNK3Q9BYP7 1800 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 RALBP11234 206 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 MIPP30301 263 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 CAND1Q86VP6 1230 aaKnown RBP11.3□□□□□ -0.6
SNX20-201ENST00000300590 DSELQ8IZU8 1212 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 NETO2Q8NC67 525 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 TFAP2BQ92481 460 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 PPWD1Q96BP3 646 aaKnown RBP11.3□□□□□ -0.6
SNX20-201ENST00000300590 GMCL1Q96IK5 515 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 COQ10BQ9H8M1 238 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 TMEM216Q9P0N5 145 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 NXF1Q9UBU9 619 aaKnown RBP11.3□□□□□ -0.6
SNX20-201ENST00000300590 WDR37Q9Y2I8 494 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 MRPL11Q9Y3B7 192 aaKnown RBP11.3□□□□□ -0.6
SNX20-201ENST00000300590 SH3PXD2BA1X283 911 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 C7orf72A4D263 438 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 SLC15A5A6NIM6 579 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 APOC4-APOC2K7ER74 178 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 NFIBO00712 420 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 DHX15O43143 795 aaKnown RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 RNASEH2AO75792 299 aaKnown RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 ZBED1O96006 694 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 APOC2P02655 101 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 ALDH1B1P30837 517 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 SLC10A2Q12908 348 aaPredicted RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 KCNJ11Q14654 390 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 TMEM198Q66K66 360 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 POTEAQ6S8J7 498 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 BNC2Q6ZN30 1099 aaPredicted RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 WDTC1Q8N5D0 677 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 SERPINI1Q99574 410 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 CORO1BQ9BR76 489 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 HAUS8Q9BT25 410 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 BRD8Q9H0E9 1235 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 PLAC1Q9HBJ0 212 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 C20orf96Q9NUD7 363 aaPredicted RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 STK39Q9UEW8 545 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 CDC14AQ9UNH5 594 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 FZD1Q9UP38 647 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 RBMX2Q9Y388 322 aaKnown RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 RNF11Q9Y3C5 154 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 SNX13Q9Y5W8 968 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 J3QRK9 145 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 ZC3H11AO75152 810 aaKnown RBP eCLIP11.29□□□□□ -0.6
SNX20-201ENST00000300590 SPAG6O75602 509 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 RAD17O75943 681 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 OCM2P0CE71 109 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 OCMP0CE72 109 aaPredicted RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 HALP42357 657 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 SESN2P58004 480 aaPredicted RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 SLC25A11Q02978 314 aaKnown RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 RELAQ04206 551 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 ART3Q13508 389 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 SLC9A4Q6AI14 798 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 PRR5LQ6MZQ0 368 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 DENND1BQ6P3S1 775 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 C16orf87Q6PH81 154 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 B3GNT9Q6UX72 402 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 CMC1Q7Z7K0 106 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 ATP2A3Q93084 1043 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 FBXL8Q96CD0 374 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 SORT1Q99523 831 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 OSBPL6Q9BZF3 934 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 ZNF219Q9P2Y4 722 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms