RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 RNF19AQ9NV58 838 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 CDH9Q9ULB4 789 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 RAD54BQ9Y620 910 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 PDE2AO00408 941 aaPredicted RBP7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 RAD51BO15315 384 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 IL1BP01584 269 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 FYNP06241 537 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 PAEPP09466 180 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 RARGP13631 454 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 YBX3P16989 372 aaKnown RBP eCLIP7.1□□□□□ -1.276e-10■□□□□ 10.4
GAPVD1-202ENST00000297933 CDC25CP30307 473 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 PWP1Q13610 501 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 ZNF268Q14587 947 aaPredicted RBP7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 KYNUQ16719 465 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 ATAT1Q5SQI0 421 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 LRIG3Q6UXM1 1119 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 SETD3Q86TU7 594 aaPredicted RBP7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 SCUBE3Q8IX30 993 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 VPS50Q96JG6 964 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 ACOX2Q99424 681 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 ILKAPQ9H0C8 392 aaPredicted RBP7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 PORCNQ9H237 461 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 SAE1Q9UBE0 346 aaPredicted RBP7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 ZNHIT2Q9UHR6 403 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 NUDT5Q9UKK9 219 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 CRYL1Q9Y2S2 319 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 GIT1Q9Y2X7 761 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 PCDHGA4Q9Y5G9 962 aa7.1□□□□□ -1.27
GAPVD1-202ENST00000297933 SLIT1O75093 1534 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 MAGEB16A2A368 324 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 PRMT3O60678 531 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 APODP05090 189 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 GPR1P46091 355 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 PSEN1P49768 467 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 GRIK3Q13003 919 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 FAM110CQ1W6H9 321 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 RAET1GQ6H3X3 334 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 PLPPR4Q7Z2D5 763 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 FAM124AQ86V42 546 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 CHPFQ8IZ52 775 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 PIK3R5Q8WYR1 880 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 ULBP1Q9BZM6 244 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.09□□□□□ -1.275e-11■■■■□ 24
GAPVD1-202ENST00000297933 CYP4F12Q9HCS2 524 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 NOP53Q9NZM5 478 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 SLC27A5Q9Y2P5 690 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 O00370 1275 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 SKAP2O75563 359 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 PARNO95453 639 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 IFNA14P01570 189 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 TCN1P20061 433 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 RPL9P32969 192 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 GLRBP48167 497 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 CDH8P55286 799 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 PRMT2P55345 433 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 SLC6A3Q01959 620 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 POU6F1Q14863 301 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 TCEA2Q15560 299 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 NFIL3Q16649 462 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 CYP2A13Q16696 494 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 POM121L1PQ3SYA9 428 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 DNAL1Q4LDG9 190 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 ATAD3BQ5T9A4 648 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 FBXO38Q6PIJ6 1188 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 NLRP9Q7RTR0 991 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 OTOP2Q7RTS6 562 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 CENPLQ8N0S6 344 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 FBXO36Q8NEA4 188 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 IL17RAQ96F46 866 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 SGSM3Q96HU1 749 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 TBL1YQ9BQ87 522 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 ROPN1BQ9BZX4 212 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 MANSC1Q9H8J5 431 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 ROPN1Q9HAT0 212 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 TMCC3Q9ULS5 477 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 V9GYQ6 96 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 BTBD19C9JJ37 291 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 ZBTB39O15060 712 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 RAD51CO43502 376 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 SERPINI2O75830 405 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 NFICP08651 508 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 SPATA31D3P0C874 917 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 CHN1P15882 459 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 TYMPP19971 482 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 TM4SF1P30408 202 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 MMP13P45452 471 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 CSHL1Q14406 222 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 SPATA31D4Q6ZUB0 917 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 C18orf25Q96B23 403 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 ZBTB45Q96K62 511 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 KCNK16Q96T55 309 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 ERP44Q9BS26 406 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 NAT9Q9BTE0 207 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 GANQ9H2C0 597 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 RHBGQ9H310 441 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 FANCEQ9HB96 536 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 ZNF510Q9Y2H8 683 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 USP20Q9Y2K6 914 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 MRPL42Q9Y6G3 142 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms