RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 TSPAN3O60637 253 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 TRIM16O95361 564 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 SPINK2P20155 84 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 MCCD1P59942 119 aaPredicted RBP14.66□□□□□ -0.06
TPM1-202ENST00000288398 NUCB2P80303 420 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 SEMA3BQ13214 749 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 TRIP4Q15650 581 aaPredicted RBP14.66□□□□□ -0.06
TPM1-202ENST00000288398 BSPRYQ5W0U4 402 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 TMEM270Q6UE05 265 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 CACUL1Q86Y37 369 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 TMPRSS6Q8IU80 811 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 PPM1KQ8N3J5 372 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 TMA16Q96EY4 203 aaKnown RBP14.66□□□□□ -0.06
TPM1-202ENST00000288398 PIWIL1Q96J94 861 aaKnown RBP14.66□□□□□ -0.06
TPM1-202ENST00000288398 NUP58Q9BVL2 599 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 CNGB3Q9NQW8 809 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 A0A1B0GTW7 788 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 SPAARA0A1B0GVQ0 90 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 TRIM49BA6NDI0 452 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 TMEM8BA6NDV4 472 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 M0QYV0 167 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 TULP2O00295 520 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 LATS1O95835 1130 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 PAEPP09466 180 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 SLC11A2P49281 568 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 SLC14A1Q13336 389 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 STILQ15468 1287 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 UNC45BQ8IWX7 931 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 ZNF557Q8N988 423 aaPredicted RBP14.65□□□□□ -0.06
TPM1-202ENST00000288398 CADM4Q8NFZ8 388 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 KCTD13Q8WZ19 329 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 NDRG1Q92597 394 aaKnown RBP14.65□□□□□ -0.06
TPM1-202ENST00000288398 SLC35C1Q96A29 364 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 DHTKD1Q96HY7 919 aaPredicted RBP14.65□□□□□ -0.06
TPM1-202ENST00000288398 CEP63Q96MT8 703 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 DDX50Q9BQ39 737 aaKnown RBP14.65□□□□□ -0.06
TPM1-202ENST00000288398 SCNM1Q9BWG6 230 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 CD248Q9HCU0 757 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 ITM2CQ9NQX7 267 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 WSB2Q9NYS7 404 aaPredicted RBP14.65□□□□□ -0.06
TPM1-202ENST00000288398 USP36Q9P275 1121 aaKnown RBP14.65□□□□□ -0.06
TPM1-202ENST00000288398 SFMBT1Q9UHJ3 866 aa14.65□□□□□ -0.06
TPM1-202ENST00000288398 BICDL2A1A5D9 508 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 YJEFN3A6XGL0 299 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 C1QTNF9BB2RNN3 333 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 E7ENQ6 273 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 O00370 1275 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 ATP5BP06576 529 aaKnown RBP14.64□□□□□ -0.07
TPM1-202ENST00000288398 C1QTNF9P0C862 333 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 MAOBP27338 520 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 FMO5P49326 533 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 RGS7P49802 495 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 TPMTP51580 245 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 ADGRF1Q5T601 910 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 NUGGCQ68CJ6 796 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 KLHL10Q6JEL2 608 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 LCLAT1Q6UWP7 414 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 CHST9Q7L1S5 443 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 FAM124AQ86V42 546 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 FAM217AQ8IXS0 508 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 AHI1Q8N157 1196 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 ZCCHC9Q8N567 271 aaKnown RBP14.64□□□□□ -0.07
TPM1-202ENST00000288398 OR2T3Q8NH03 318 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 SORCS1Q8WY21 1168 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 IRGQQ8WZA9 623 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 SNX19Q92543 992 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 TIGD1Q96MW7 591 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 MKRN2Q9H000 416 aaKnown RBP14.64□□□□□ -0.07
TPM1-202ENST00000288398 FBRSQ9HAH7 460 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 CD93Q9NPY3 652 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 DNAAF2Q9NVR5 837 aaKnown RBP14.64□□□□□ -0.07
TPM1-202ENST00000288398 NFE2L3Q9Y4A8 694 aa14.64□□□□□ -0.07
TPM1-202ENST00000288398 TNRC6BQ9UPQ9 1833 aaKnown RBP14.64□□□□□ -0.07
TPM1-202ENST00000288398 MSI1O43347 362 aaKnown RBP14.63□□□□□ -0.07
TPM1-202ENST00000288398 HYAL3O43820 417 aaPredicted RBP14.63□□□□□ -0.07
TPM1-202ENST00000288398 FBXO21O94952 628 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 CER1O95813 267 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 POLR2EP19388 210 aaKnown RBP14.63□□□□□ -0.07
TPM1-202ENST00000288398 PRKCHP24723 683 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 HOXD9P28356 352 aaPredicted RBP14.63□□□□□ -0.07
TPM1-202ENST00000288398 PMS1P54277 932 aaKnown RBP14.63□□□□□ -0.07
TPM1-202ENST00000288398 DAOAP59103 153 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 ST8SIA6P61647 398 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 GRIK2Q13002 908 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 ENPP2Q13822 863 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 ZNF423Q2M1K9 1284 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 DCAF12L1Q5VU92 463 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 ISM2Q6H9L7 571 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 IL27RAQ6UWB1 636 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 PIP4P1Q86T03 277 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 ZC3H3Q8IXZ2 948 aaKnown RBP14.63□□□□□ -0.07
TPM1-202ENST00000288398 OR2I1PQ8NGU4 316 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 ERCC4Q92889 916 aaPredicted RBP14.63□□□□□ -0.07
TPM1-202ENST00000288398 LHX5Q9H2C1 402 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 ABCB8Q9NUT2 735 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 GGA2Q9UJY4 613 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 NEUROG3Q9Y4Z2 214 aa14.63□□□□□ -0.07
TPM1-202ENST00000288398 GON4LQ3T8J9 2241 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 PIK3R2O00459 728 aa14.62□□□□□ -0.07
TPM1-202ENST00000288398 BCAT2O15382 392 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms