RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TJP2Q9UDY2 1190 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 C4AP0C0L4 1744 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 C4BP0C0L5 1744 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 APOC4-APOC2K7ER74 178 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 BNIP3LO60238 219 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 APOC2P02655 101 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 TCHHL1Q5QJ38 904 aaPredicted RBP12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 WLSQ5T9L3 541 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 DEFB107AQ8IZN7 70 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 TAGAPQ8N103 731 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 DNERQ8NFT8 737 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 NDNQ99608 321 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 CDT1Q9H211 546 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 GGA2Q9UJY4 613 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 BARX2Q9UMQ3 279 aaPredicted RBP12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 CAB39Q9Y376 341 aaPredicted RBP12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 MYH3P11055 1940 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 SIGLEC16A6NMB1 481 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 SPATA31C2B4DYI2 1134 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 FKBP6O75344 327 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 MT-CO1P00395 513 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 HMBSP08397 361 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 CCDC130P13994 396 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 CYP2B6P20813 491 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 TGM2P21980 687 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 SERPINB9P50453 376 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 STILQ15468 1287 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 CATSPERGQ6ZRH7 1159 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 ZBTB49Q6ZSB9 765 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 COLGALT1Q8NBJ5 622 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 MTFR1LQ9H019 292 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 TELO2Q9Y4R8 837 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 SLIT2O94813 1529 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 SLC25A27O95847 323 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 FAM58BPP0C7Q3 252 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 ITGA9Q13797 1035 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 VGLL4Q14135 290 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 ZNF268Q14587 947 aaPredicted RBP12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 BORCS6Q96GS4 357 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 BTBD10Q9BSF8 475 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 B3GNT5Q9BYG0 378 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 ARHGAP28Q9P2N2 729 aa12.89□□□□□ -0.35
SLC6A1-201ENST00000287766 GOLGA8CPA6NN73 597 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 SRRM3A6NNA2 597 aaPredicted RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 IRF6O14896 467 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 TBC1D4O60343 1298 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 MGAT1P26572 445 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 TRIM25Q14258 630 aaKnown RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 N4BP2L1Q5TBK1 243 aaPredicted RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 EFCAB3Q8N7B9 438 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 HASPINQ8TF76 798 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 EDEM1Q92611 657 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 EZH1Q92800 747 aaPredicted RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 CELF6Q96J87 481 aaKnown RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 ACO2Q99798 780 aaKnown RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 COL14A1Q05707 1796 aaKnown RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 ECHS1P30084 290 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 RUNX1T1Q06455 604 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 PDK1Q15118 436 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 SPOUT1Q5T280 376 aaKnown RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 ZCCHC7Q8N3Z6 543 aaKnown RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 RIN3Q8TB24 985 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 GDPD5Q8WTR4 605 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 PYDC1Q8WXC3 89 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 VPS50Q96JG6 964 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 EPAS1Q99814 870 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 GORASP1Q9BQQ3 440 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 TMEM79Q9BSE2 394 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 PDGFCQ9NRA1 345 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 C3orf70A6NLC5 250 aaPredicted RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 ZNF839A8K0R7 811 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 SMAPO00193 183 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 TSC22D2O75157 780 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 C6orf222P0C671 652 aaPredicted RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 ATP6V1E1P36543 226 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 C21orf59P57076 290 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 LAMC2Q13753 1193 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 ADRM1Q16186 407 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 FAM183BPQ6ZVS7 135 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 PCYOX1LQ8NBM8 494 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 SPON2Q9BUD6 331 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 FAM192AQ9GZU8 254 aa12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 CPSF3Q9UKF6 684 aaKnown RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
SLC6A1-201ENST00000287766 SDR42E2A6NKP2 422 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 TM9SF1O15321 606 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 SNX2O60749 519 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 SPRP35270 261 aaPredicted RBP12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 BLVRAP53004 296 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 PDK4Q16654 411 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 FNBP1LQ5T0N5 605 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 RNF220Q5VTB9 566 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 SLC39A4Q6P5W5 647 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 CCDC80Q76M96 950 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 TMPRSS6Q8IU80 811 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 ANKRD13AQ8IZ07 590 aa12.87□□□□□ -0.35
SLC6A1-201ENST00000287766 ABI1Q8IZP0 508 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms