RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 AKR1B10O60218 316 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 ACSL4O60488 711 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 GREM1O60565 184 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 TBL1XO60907 577 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 MFAP3LO75121 409 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 TULP3O75386 442 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 LATS1O95835 1130 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 IGLV3-27P01718 113 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 PLEKP08567 350 aaPredicted RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 CHRNB1P11230 501 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 KRT3P12035 628 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 PDGFRAP16234 1089 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 TFE3P19532 575 aaPredicted RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 GPD1P21695 349 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 RRM1P23921 792 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 RDXP35241 583 aaKnown RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 TIE1P35590 1138 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 SCNN1AP37088 669 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 GGCXP38435 758 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 PRKCIP41743 596 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 GRIA2P42262 883 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 MAGEA9P43362 315 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 ADKP55263 362 aaKnown RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 CSTF1Q05048 431 aaKnown RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 RING1Q06587 406 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 MTAPQ13126 283 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 NNTQ13423 1086 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 CDH18Q13634 790 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 ANGPT1Q15389 498 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 MPPE1Q53F39 396 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 C2orf27AQ580R0 203 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 TMEM196Q5HYL7 178 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 ADGRF1Q5T601 910 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 SCYL2Q6P3W7 929 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 TSSK4Q6SA08 328 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 SARM1Q6SZW1 724 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 MON1BQ7L1V2 547 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 BEND5Q7L4P6 421 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 FAM131BQ86XD5 332 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 GAS2L3Q86XJ1 694 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 PHF13Q86YI8 300 aaPredicted RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 CNGA4Q8IV77 575 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 MFN1Q8IWA4 741 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 MCOLN2Q8IZK6 566 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 LGI2Q8N0V4 545 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 CFAP52Q8N1V2 620 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 CPXM2Q8N436 756 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 CARNMT1Q8N4J0 409 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 HJURPQ8NCD3 748 aaPredicted RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 C3orf20Q8ND61 904 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 OR8K1Q8NGG5 319 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 RPLP0P6Q8NHW5 317 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 JOSD2Q8TAC2 188 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 RXFP2Q8WXD0 754 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 SYN2Q92777 582 aaPredicted RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 ATOH1Q92858 354 aaPredicted RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 ERLEC1Q96DZ1 483 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 TMA16Q96EY4 203 aaKnown RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 TRIM11Q96F44 468 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 BTN2A3PQ96KV6 586 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 RPRD1AQ96P16 312 aaPredicted RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 PRRX2Q99811 253 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 CIPCQ9C0C6 399 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 TKTL2Q9H0I9 626 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 SIK2Q9H0K1 926 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 WDCPQ9H6R7 721 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 FBRSL1Q9HCM7 1045 aaKnown RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 ZDHHC4Q9NPG8 344 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 PIGVQ9NUD9 493 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 ABHD10Q9NUJ1 306 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.78□□□□□ -1.32
CD44-204ENST00000279452 RRN3Q9NYV6 651 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 CNOT8Q9UFF9 292 aaKnown RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 ADAMTS1Q9UHI8 967 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 XPO7Q9UIA9 1087 aaKnown RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 SLC8A2Q9UPR5 921 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 SPTBN5Q9NRC6 3674 aaKnown RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 SHISA7A6NL88 538 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 KCNU1A8MYU2 1149 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 GOLGA6L6A8MZA4 724 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 AKR1B15C9JRZ8 316 aaPredicted RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 H0Y626 953 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 DDX3XO00571 662 aaKnown RBP eCLIP6.77□□□□□ -1.33
CD44-204ENST00000279452 TRIM24O15164 1050 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 AP5Z1O43299 807 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 CACNG3O60359 315 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 ATG13O75143 517 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 RTN2O75298 545 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 PAGE1O75459 146 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 KLF8O95600 359 aaPredicted RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 F9P00740 461 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 FTLP02792 175 aaPredicted RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 TACR2P21452 398 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 PSMA2P25787 234 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 SLC6A4P31645 630 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 RFC1P35251 1148 aaPredicted RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 EIF4A3P38919 411 aaKnown RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 EIF2DP41214 584 aaKnown RBP6.77□□□□□ -1.33
CD44-204ENST00000279452 WASP42768 502 aa6.77□□□□□ -1.33
CD44-204ENST00000279452 RPS9P46781 194 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms