RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SLC7A1P30825 629 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 CNR2P34972 360 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 WASP42768 502 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 CCT4P50991 539 aaKnown RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 ZNF41P51814 821 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 TKTL1P51854 596 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 PPP5CP53041 499 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 POLE2P56282 527 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 NKX6-1P78426 367 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 DSC2Q02487 901 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 DDR1Q08345 913 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 C17orf67Q0P5P2 114 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 CUL4BQ13620 913 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 USP10Q14694 798 aaKnown RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 OASLQ15646 514 aaKnown RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 CCDC157Q569K6 752 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 ZMAT1Q5H9K5 638 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 TTC38Q5R3I4 469 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 PRR31Q5SQ13 230 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 ATPAF1Q5TC12 328 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 THEMIS2Q5TEJ8 643 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 ESRP1Q6NXG1 681 aaKnown RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 GLB1LQ6UWU2 654 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 Q6ZUG5 572 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 RUFY3Q7L099 469 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 PIWIL3Q7Z3Z3 882 aaKnown RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 CXorf67Q86X51 503 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 PROSER1Q86XN7 944 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 ARMC8Q8IUR7 673 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 ZFPM1Q8IX07 1006 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 KBTBD2Q8IY47 623 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 ZBTB44Q8NCP5 570 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 MNS1Q8NEH6 495 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 ETNPPLQ8TBG4 499 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 TBC1D22AQ8WUA7 517 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 KRT35Q92764 455 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 SDCCAG3Q96C92 435 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 RNF125Q96EQ8 232 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 NEIL1Q96FI4 390 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 RAX2Q96IS3 184 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 RUNDC3BQ96NL0 473 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 UIMC1Q96RL1 719 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 TUBGCP5Q96RT8 1024 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 OR10A5Q9H207 317 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 TNMDQ9H2S6 317 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 SUDS3Q9H7L9 328 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 SERHLQ9NQF3 203 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 DECR2Q9NUI1 292 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.89□□□□□ -1.63
CD44-202ENST00000278385 BABAM1Q9NWV8 329 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 UTP6Q9NYH9 597 aaKnown RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 CPNE7Q9UBL6 633 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 UBA2Q9UBT2 640 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 MSRAQ9UJ68 235 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 ZNF215Q9UL58 517 aaPredicted RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 C2CD2Q9Y426 696 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 KIF3AQ9Y496 699 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 USP16Q9Y5T5 823 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 MYBBP1AQ9BQG0 1328 aaKnown RBP4.89□□□□□ -1.63
CD44-202ENST00000278385 COL15A1P39059 1388 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 SRCAPQ6ZRS2 3230 aa4.89□□□□□ -1.63
CD44-202ENST00000278385 CCDC78A2IDD5 438 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 H3BNC9 293 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 PSMA7O14818 248 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 ZBTB14O43829 449 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 PRPSAP2O60256 369 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 B4GALT4O60513 344 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 KERAO60938 352 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 COQ9O75208 318 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 PPFIA2O75334 1257 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 PALMO75781 387 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 APOL3O95236 402 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 KNG1P01042 644 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 HMGCRP04035 888 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 KITP10721 976 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 GZMAP12544 262 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 TNNT1P13805 278 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 KCNA3P22001 575 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 PTX3P26022 381 aaPredicted RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 ABCD3P28288 659 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 PBLDP30039 288 aaPredicted RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 ADSLP30566 484 aaPredicted RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 HOXA11P31270 313 aaPredicted RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 TCF7P36402 384 aaPredicted RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 ARL3P36405 182 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 THPOP40225 353 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 GPC3P51654 580 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 MANFP55145 182 aaKnown RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 SUMO3P55854 103 aaPredicted RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 RIPK4P57078 832 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 SLC26A5P58743 744 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 ACTR2P61160 394 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 PLP2Q04941 152 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 ZBTB16Q05516 673 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.88□□□□□ -1.63
CD44-202ENST00000278385 ACTN3Q08043 901 aaPredicted RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 AIMP1Q12904 312 aaKnown RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 EIF2B5Q13144 721 aaKnown RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 NAA25Q14CX7 972 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms