RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 Q7L0L9 218 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 ZC3H18Q86VM9 953 aaKnown RBP13.36□□□□□ -0.27
C9orf3-201ENST00000277198 SRPK1Q96SB4 655 aaKnown RBP13.36□□□□□ -0.27
C9orf3-201ENST00000277198 NT5C1AQ9BXI3 368 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 TMEM120AQ9BXJ8 343 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 POPDC2Q9HBU9 364 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 ERAP1Q9NZ08 941 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 ZC3H7BQ9UGR2 993 aaKnown RBP13.36□□□□□ -0.27
C9orf3-201ENST00000277198 HMGXB4Q9UGU5 601 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 PLLPQ9Y342 182 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 TTLL3Q9Y4R7 772 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 CHD9Q3L8U1 2897 aa13.36□□□□□ -0.27
C9orf3-201ENST00000277198 I3L4J1 428 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 GYG2O15488 501 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 GSC2O15499 205 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 KCNN4O15554 427 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 ZBED1O96006 694 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 CNTFP26441 200 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 MAGEA3P43357 314 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 NR2C2P49116 596 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 SERPINB9P50453 376 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 MMRN1Q13201 1228 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 TMEM132DQ14C87 1099 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 LRIT3Q3SXY7 679 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 TMEM240Q5SV17 173 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 OR6B2Q6IFH4 312 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 CDKL3Q8IVW4 592 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-201ENST00000277198 APLFQ8IW19 511 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-201ENST00000277198 TMEM192Q8IY95 271 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 C7orf31Q8N865 590 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 TTC17Q96AE7 1141 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 KLF6Q99612 283 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-201ENST00000277198 MIPEPQ99797 713 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 SIKE1Q9BRV8 207 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 CADM1Q9BY67 442 aaKnown RBP13.35□□□□□ -0.27
C9orf3-201ENST00000277198 MINDY3Q9H8M7 445 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 ETNK2Q9NVF9 386 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 TSPAN16Q9UKR8 245 aa13.35□□□□□ -0.27
C9orf3-201ENST00000277198 CORO1CQ9ULV4 474 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-201ENST00000277198 A8MXQ7 604 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 TRIM49D1C9J1S8 452 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 E5RJQ4 531 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 H3BRB1 525 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 BIRC5O15392 142 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 C22orf31O95567 290 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 APOEP02649 317 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 ACADSP16219 412 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 TPSB2P20231 275 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 ATP6V1C1P21283 382 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SERPINB3P29508 390 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 OVGP1Q12889 678 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 TPSAB1Q15661 275 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 TBCCQ15814 346 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 AMHR2Q16671 573 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 TSNAXIP1Q2TAA8 658 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SLC10A6Q3KNW5 377 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 CCDC14Q49A88 953 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 STXBP5Q5T5C0 1151 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 NPNTQ6UXI9 565 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 FAM183BPQ6ZVS7 135 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 ARCQ7LC44 396 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 TMEM110Q86TL2 294 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SESTD1Q86VW0 696 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 PQLC3Q8N755 202 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 ZBTB10Q96DT7 871 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 OXNAD1Q96HP4 312 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SLC4A5Q9BY07 1137 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 GCOM2Q9BZD3 368 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-201ENST00000277198 TUT1Q9H6E5 874 aaKnown RBP13.34□□□□□ -0.27
C9orf3-201ENST00000277198 PRDM16Q9HAZ2 1276 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 CXXC1Q9P0U4 656 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SIRPGQ9P1W8 387 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 CHD7Q9P2D1 2997 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SCN5AQ14524 2016 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 GCATO75600 419 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 IQCF3P0C7M6 154 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SMIM10L2AP0DMW4 78 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SMIM10L2BP0DMW5 78 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 BGNP21810 368 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SDC4P31431 198 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SCNN1AP37088 669 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 PTDSS1P48651 473 aaKnown RBP13.34□□□□□ -0.27
C9orf3-201ENST00000277198 NDST1P52848 882 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 TRNP1Q6NT89 227 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 TIFABQ6ZNK6 161 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 DEFB128Q7Z7B8 93 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 CAND1Q86VP6 1230 aaKnown RBP13.34□□□□□ -0.27
C9orf3-201ENST00000277198 LMNTD2Q8IXW0 634 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 PPM1NQ8N819 430 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 GSDMBQ8TAX9 411 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 UBA3Q8TBC4 463 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 TRIM6Q9C030 488 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-201ENST00000277198 RNPEPQ9H4A4 650 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 PDZD7Q9H5P4 517 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 PCDH18Q9HCL0 1135 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 XAB2Q9HCS7 855 aaKnown RBP13.34□□□□□ -0.27
C9orf3-201ENST00000277198 ARL8BQ9NVJ2 186 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.34□□□□□ -0.27
C9orf3-201ENST00000277198 SORCS3Q9UPU3 1222 aa13.34□□□□□ -0.27
C9orf3-201ENST00000277198 NOD1Q9Y239 953 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms