RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 RNF43Q68DV7 783 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 GBA2Q9HCG7 927 aaPredicted RBP10.83□□□□□ -0.68
OTOF-201ENST00000272371 BAIAP2Q9UQB8 552 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 ZC3H4Q9UPT8 1303 aaKnown RBP10.83□□□□□ -0.68
OTOF-201ENST00000272371 CPDO75976 1380 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 ABLIM1O14639 778 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 KATNA1O75449 491 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 FOLH1Q04609 750 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 LPIN1Q14693 890 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 WDR72Q3MJ13 1102 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 SGMS1Q86VZ5 419 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 CAMK1DQ8IU85 385 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 HS6ST3Q8IZP7 471 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 URGCPQ8TCY9 931 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 PROX1Q92786 737 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 DGCR14Q96DF8 476 aaKnown RBP10.83□□□□□ -0.68
OTOF-201ENST00000272371 SRPK1Q96SB4 655 aaKnown RBP10.83□□□□□ -0.68
OTOF-201ENST00000272371 PARK7Q99497 189 aaKnown RBP10.83□□□□□ -0.68
OTOF-201ENST00000272371 LRMDAQ9H2I8 198 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 SEMA4AQ9H3S1 761 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 TMEM8AQ9HCN3 771 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 RAB23Q9ULC3 237 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 FAM50BQ9Y247 325 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 STARD13Q9Y3M8 1113 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 GAS2O43903 313 aaKnown RBP10.83□□□□□ -0.68
OTOF-201ENST00000272371 SERPINE1P05121 402 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 RAB25P57735 213 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 SAMD4BQ5PRF9 694 aaKnown RBP10.83□□□□□ -0.68
OTOF-201ENST00000272371 NECAB2Q7Z6G3 386 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 ZNF671Q8TAW3 534 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 ITFG1Q8TB96 612 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 SKA1Q96BD8 255 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 L3MBTL3Q96JM7 780 aaPredicted RBP10.83□□□□□ -0.68
OTOF-201ENST00000272371 ELP3Q9H9T3 547 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 PCDH12Q9NPG4 1184 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 NAGPAQ9UK23 515 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 FEM1BQ9UK73 627 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 CEP170BQ9Y4F5 1589 aaPredicted RBP10.83□□□□□ -0.68
OTOF-201ENST00000272371 TMEM88BA6NKF7 163 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 FAM153BP0C7A2 387 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 KCNJ2P63252 427 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 TYSND1Q2T9J0 566 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 FAM153CQ494X1 144 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 TTMPQ5BVD1 217 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 SCARA3Q6AZY7 606 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 ACAD9Q9H845 621 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 MSRAQ9UJ68 235 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 NUDT5Q9UKK9 219 aa10.83□□□□□ -0.68
OTOF-201ENST00000272371 FOXN3O00409 490 aaPredicted RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 PLOD3O60568 738 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 ANXA9O76027 345 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 UNC5CO95185 931 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 VAV1P15498 845 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 PTENP60484 403 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 LSM3P62310 102 aaKnown RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 IFI35P80217 286 aaPredicted RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 GPAT2Q6NUI2 795 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 PROSER1Q86XN7 944 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 MAGEE2Q8TD90 523 aaPredicted RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 TMEM138Q9NPI0 162 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 GDF3Q9NR23 364 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 TULP4Q9NRJ4 1543 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 KHDRBS3O75525 346 aaKnown RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 DBTP11182 482 aaKnown RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 GTF2H1P32780 548 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 SNRNP48Q6IEG0 339 aaKnown RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 DHDDSQ86SQ9 333 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 CCDC185Q8N715 623 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 BPIFB6Q8NFQ5 453 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 CAMKK2Q96RR4 588 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 ZNF341Q9BYN7 854 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 ARHGEF40Q8TER5 1519 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 CCNKO75909 580 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 RARBP10826 455 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 ACOT2P49753 483 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 DDX39BQ13838 428 aaKnown RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 SNX32Q86XE0 403 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 KBTBD8Q8NFY9 601 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 GPRASP2Q96D09 838 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 EHD4Q9H223 541 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 ITSN1Q15811 1721 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 COL15A1P39059 1388 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 PAICSP22234 425 aaKnown RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 GRAPQ13588 217 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 N4BP2L1Q5TBK1 243 aaPredicted RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 ERICH5Q6P6B1 374 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 ZNF276Q8N554 614 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 CAMKK1Q8N5S9 505 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 GRAPLQ8TC17 118 aaPredicted RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 SPPL2AQ8TCT8 520 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 ATXN2Q99700 1313 aaKnown RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 PREX1Q8TCU6 1659 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 C1orf167Q5SNV9 1468 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 MRASO14807 208 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 ZNF37AP17032 561 aaPredicted RBP10.82□□□□□ -0.68
OTOF-201ENST00000272371 PRKAA1Q13131 559 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 GPR63Q9BZJ6 419 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 PHACTR1Q9C0D0 580 aa10.82□□□□□ -0.68
OTOF-201ENST00000272371 PNPLA3Q9NST1 481 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms