RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 PNPLA4P41247 253 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 SLC11A1P49279 550 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 TRIP13Q15645 432 aaPredicted RBP13.08□□□□□ -0.32
PRPF6-201ENST00000266079 CNPY1Q3B7I2 92 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 RASIP1Q5U651 963 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 OTOAQ7RTW8 1153 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 PRUNE1Q86TP1 453 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 COLGALT2Q8IYK4 626 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 UBR7Q8N806 425 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 ZNF398Q8TD17 642 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 TMEM176AQ96HP8 235 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 C9orf72Q96LT7 481 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 YME1L1Q96TA2 773 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 ZBED2Q9BTP6 218 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 NT5C1AQ9BXI3 368 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 VRTNQ9H8Y1 702 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 IL23AQ9NPF7 189 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 ZNF212Q9UDV6 495 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 RPS6KL1Q9Y6S9 549 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 TANC1Q9C0D5 1861 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 FGBP02675 491 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 ZNF184Q99676 751 aaPredicted RBP13.07□□□□□ -0.32
PRPF6-201ENST00000266079 TRABDQ9H4I3 376 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 CHST7Q9NS84 486 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 DDX43Q9NXZ2 648 aaKnown RBP13.07□□□□□ -0.32
PRPF6-201ENST00000266079 ATXN10Q9UBB4 475 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 SMG5Q9UPR3 1016 aaKnown RBP13.07□□□□□ -0.32
PRPF6-201ENST00000266079 LYNP07948 512 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 MAN1A1P33908 653 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 BTG3Q14201 252 aaPredicted RBP13.07□□□□□ -0.32
PRPF6-201ENST00000266079 LLGL1Q15334 1064 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 CD300LGQ6UXG3 332 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 RELL1Q8IUW5 271 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 DTX3LQ8TDB6 740 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 STMN2Q93045 179 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 TOP1MTQ969P6 601 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 TUBB6Q9BUF5 446 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 CCDC28BQ9BUN5 200 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 KRT82Q9NSB4 513 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRPF6-201ENST00000266079 MICAL3Q7RTP6 2002 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 RALGAPA2Q2PPJ7 1873 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 ABHD14A-ACY1A0A1B0GW23 586 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 CLDN5O00501 218 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 GAS8O95995 478 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 AMHP03971 560 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 ABHD2P08910 425 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 OR4Q2P0C623 313 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 UBTFL6P0CB48 400 aaPredicted RBP13.07□□□□□ -0.32
PRPF6-201ENST00000266079 ADCY8P40145 1251 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 ZNF132P52740 706 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 ARPP19P56211 112 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 DSC1Q08554 894 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 USP4Q13107 963 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 FYB2Q5VWT5 728 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 DENND1BQ6P3S1 775 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 CRIPAKQ8N1N5 446 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 GRK7Q8WTQ7 553 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 FAM81BQ96LP2 452 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 TMEM209Q96SK2 561 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 C11orf70Q9BRQ4 267 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 SPATA16Q9BXB7 569 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 GPR62Q9BZJ7 368 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 OCEL1Q9H607 264 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
PRPF6-201ENST00000266079 KANSL3Q9P2N6 904 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 TJP2Q9UDY2 1190 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 NUMBLQ9Y6R0 609 aa13.07□□□□□ -0.32
PRPF6-201ENST00000266079 ALPK3Q96L96 1907 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 M0QYV0 167 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 TNRC18O15417 2968 aaPredicted RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 ALDH2P05091 517 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 TKTP29401 623 aaKnown RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 RPL9P32969 192 aaKnown RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 YWHAEP62258 255 aaKnown RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 PPP1R26Q5T8A7 1209 aaPredicted RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 KBTBD2Q8IY47 623 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 ZNF564Q8TBZ8 553 aaPredicted RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 PTCD3Q96EY7 689 aaKnown RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 BTBD6Q96KE9 485 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 PLVAPQ9BX97 442 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 CYP3A43Q9HB55 503 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 ARL8BQ9NVJ2 186 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 GTF3C4Q9UKN8 822 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 UNC80Q8N2C7 3258 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 DGKIO75912 1065 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 PENKP01210 267 aaPredicted RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 CYP1A1P04798 512 aaPredicted RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 RPA3P35244 121 aaPredicted RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 RFC2P35250 354 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 RGS7P49802 495 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 BPIFB4P59827 614 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 SLC1A5Q15758 541 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 HHATQ5VTY9 493 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 FAM171A1Q5VUB5 890 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 KIAA0319Q5VV43 1072 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 BCL7CQ8WUZ0 217 aaPredicted RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 ATG4AQ8WYN0 398 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 RSPH1Q8WYR4 309 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 ZNF75CPQ92670 426 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms