RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 DIP2BQ9P265 1576 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 MAPTP10636 758 aaKnown RBP17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 GHRP10912 638 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 ITGALP20701 1170 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 CYP2F1P24903 491 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 ATP12AP54707 1039 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 ITGA1P56199 1179 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 ANGEL2Q5VTE6 544 aaKnown RBP17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 OSCP1Q8WVF1 389 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 C2CD2LO14523 706 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 STAG3L1P0CL83 205 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 FDPSP14324 419 aaKnown RBP17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 VAC14Q08AM6 782 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 MGAT5Q09328 741 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 FBXO25Q8TCJ0 367 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 TMEM176AQ96HP8 235 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 WDR41Q9HAD4 459 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 NME5P56597 212 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 HERVK_113P62684 666 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 ENKURQ8TC29 256 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 C9orf16Q9BUW7 83 aa17.89■□□□□ 0.45
NOTCH3-201ENST00000263388 MROH2AA6NES4 1674 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 ZBTB7AO95365 584 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 GIT2Q14161 759 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 NFIL3Q16649 462 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 TBCELQ5QJ74 424 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 SNX8Q9Y5X2 465 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 ANXA6P08133 673 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 SPDYCQ5MJ68 293 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 ASB2Q96Q27 587 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 NUDT12Q9BQG2 462 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 TMEM39BQ9GZU3 492 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 ECDO95905 644 aaPredicted RBP17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 POU1F1P28069 291 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 NOS3P29474 1203 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 PPP4CP60510 307 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 MED8Q96G25 268 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 CD3EAPO15446 510 aaKnown RBP17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 ATP6V1C1P21283 382 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 PTPAQ15257 358 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 ATAD3BQ5T9A4 648 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 TMEM132CQ8N3T6 1108 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 ACO1P21399 889 aaKnown RBP17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 SKIV2L2P42285 1042 aaKnown RBP17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 RPL10AP62906 217 aaKnown RBP17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 MYBPC2Q14324 1141 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 PCNX4Q63HM2 1172 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 CROCCP3Q8IVE0 287 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 OR6Y1Q8NGX8 325 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 RORBQ92753 470 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 OSBPL6Q9BZF3 934 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 IFNGR2P38484 337 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 NPTX2P47972 431 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 STX4Q12846 297 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 GRB10Q13322 594 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 KYAT3Q6YP21 454 aaKnown RBP17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 ZNF720Q7Z2F6 126 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 STARD8Q92502 1023 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 FBXO44Q9H4M3 255 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 KLHL28Q9NXS3 571 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 RIPK2O43353 540 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 PROSCO94903 275 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 CDK7P50613 346 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 IL5RAQ01344 420 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 RSBN1Q5VWQ0 802 aaPredicted RBP17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 TMC3Q7Z5M5 1100 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 HEATR4Q86WZ0 1026 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 CDK20Q8IZL9 346 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 SNRNP27Q8WVK2 155 aaKnown RBP17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 MCRS1Q96EZ8 462 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 STK39Q9UEW8 545 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 TPRKBQ9Y3C4 175 aa17.88■□□□□ 0.45
NOTCH3-201ENST00000263388 ERVK-10P10266 1014 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 BGNP21810 368 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 WARSP23381 471 aaKnown RBP17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 HPCAL1P37235 193 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 KIF1AQ12756 1690 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 SAR1AQ9NR31 198 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 TLR8Q9NR97 1041 aaKnown RBP17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 NAALADL1Q9UQQ1 740 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 ATP9AO75110 1047 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 RRM1P23921 792 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 CHRNA5P30532 468 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 FEN1P39748 380 aaKnown RBP17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 BST2Q10589 180 aaKnown RBP17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 CASP12Q6UXS9 341 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 FAM120BQ96EK7 910 aaKnown RBP17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 NT5MQ9NPB1 228 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 RAD51BO15315 384 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 INPP4BO15327 924 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 SERPINE1P05121 402 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 AKAP5P24588 427 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 DENND6AQ8IWF6 608 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 TMC2Q8TDI7 906 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 APOPT1Q96IL0 206 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 CAMTA2O94983 1202 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 TGFBR2P37173 567 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 NDUFAF6Q330K2 333 aa17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 TCHHL1Q5QJ38 904 aaPredicted RBP17.87■□□□□ 0.45
NOTCH3-201ENST00000263388 TRPM5Q9NZQ8 1165 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms