RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 ZNF33AQ06730 810 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 FMR1Q06787 632 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TBX2Q13207 712 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 FLOT2Q14254 428 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 RFX4Q33E94 735 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SPOCD1Q6ZMY3 1216 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TLK2Q86UE8 772 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 HJURPQ8NCD3 748 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SLC22A17Q8WUG5 538 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 FAM192AQ9GZU8 254 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TASP1Q9H6P5 420 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 RXFP1Q9HBX9 757 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-202ENST00000261517 SQORQ9Y6N5 450 aa4.43□□□□□ -1.7
VPS13C-202ENST00000261517 TCP11X1B4DZS4 312 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 DDHD2O94830 711 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ACOT2P49753 483 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SLC7A5Q01650 507 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 CUL3Q13618 768 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TIMM50Q3ZCQ8 353 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ZFP28Q8NHY6 868 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 HES6Q96HZ4 224 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SYT15Q9BQS2 421 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 BDH2Q9BUT1 245 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 DNMT3LQ9UJW3 386 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 DOLKQ9UPQ8 538 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PEAK1Q9H792 1746 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 UBA6A0AVT1 1052 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MYBL2P10244 700 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 RPS6KA3P51812 740 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SNRPD1P62314 119 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TRIP4Q15650 581 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ALG11Q2TAA5 492 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ANKS6Q68DC2 871 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 DDX53Q86TM3 631 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TRIM48Q8IWZ4 208 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SVOPQ8N4V2 548 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SLAIN1Q8ND83 568 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ARMC2Q8NEN0 867 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 OR56A4Q8NGH8 313 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MYCBPAPQ8TBZ2 947 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 CLMNQ96JQ2 1002 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TINF2Q9BSI4 451 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SNAPC5O75971 98 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ADH1AP07327 375 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ATP4AP20648 1035 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SOX6P35712 828 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 AVPR1AP37288 418 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SLCO1A2P46721 670 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 NEK2P51955 445 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 ITGA1P56199 1179 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TBX4P57082 545 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MARC1Q5VT66 337 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 POTEHQ6S545 545 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 C1orf186Q6ZWK4 172 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 RTL10Q7L3V2 364 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MCOLN3Q8TDD5 553 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MFSD14AQ96MC6 490 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 OSBPL10Q9BXB5 764 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 HEMGNQ9BXL5 484 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SLC2A11Q9BYW1 496 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 METTL5Q9NRN9 209 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 KLC4Q9NSK0 619 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 WWOXQ9NZC7 414 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SAE1Q9UBE0 346 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 RNF112Q9ULX5 631 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MICAL3Q7RTP6 2002 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 M0QYT0 321 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 WNT10BO00744 389 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 RHOCP08134 193 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MAP2K5Q13163 448 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TRIM68Q6AZZ1 485 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 R3HCC1LQ7Z5L2 792 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 HORMAD1Q86X24 394 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SLC7A5P2Q9GIP4 190 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 GPR88Q9GZN0 384 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 POLR1EQ9GZS1 481 aaKnown RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 SIK2Q9H0K1 926 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 KCNK4Q9NYG8 393 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 FAM153AQ9UHL3 310 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MSRAQ9UJ68 235 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 GNPTGQ9UJJ9 305 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 B3GAT3O94766 335 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PFKLP17858 780 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 VHLP40337 213 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TWF1Q12792 350 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MMRN1Q13201 1228 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TSTA3Q13630 321 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MGAT5BQ3V5L5 792 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 KIAA0408Q6ZU52 694 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 RFX8Q6ZV50 586 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 AGBL1Q96MI9 1066 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 TAAR1Q96RJ0 339 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 LAMA4Q16363 1823 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PDHXO00330 501 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 PSMD10O75832 226 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 RECQL5O94762 991 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-202ENST00000261517 FGF1P05230 155 aa4.42□□□□□ -1.7
VPS13C-202ENST00000261517 MSH3P20585 1137 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms