RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 KCTD17Q8N5Z5 321 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 FRMD8Q9BZ67 464 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 KLHL3Q9UH77 587 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 AP4B1Q9Y6B7 739 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 MYOM1P52179 1685 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZNF197O14709 1029 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 PSMD3O43242 534 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 BANF1O75531 89 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 KLHL18O94889 574 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 ALADP13716 330 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 CHKAP35790 457 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 BOLA3Q53S33 107 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 MFSD7Q6UXD7 560 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 CRAMP1Q96RY5 1269 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 TEX13BQ9BXU2 312 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 DKK3Q9UBP4 350 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZNF70Q9UC06 446 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 DIP2BQ9P265 1576 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 ATXN2Q99700 1313 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 PPLO60437 1756 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 TRIM13O60858 407 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 CSDE1O75534 798 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 NAA20P61599 178 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLC9A5Q14940 896 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 PGS1Q32NB8 556 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 TYW3Q6IPR3 259 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 TTC27Q6P3X3 843 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 CES3Q6UWW8 571 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 CITED4Q96RK1 184 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 KRT84Q9NSB2 600 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 TDRKHQ9Y2W6 561 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 SRRM3A6NNA2 597 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 ATG7O95352 703 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 HMBSP08397 361 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 PBX1P40424 430 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 DLG4P78352 724 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 STILQ15468 1287 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 MOXD1Q6UVY6 613 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 C3orf67Q6ZVT6 689 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLC44A2Q8IWA5 706 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 UNC45BQ8IWX7 931 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 DGCR14Q96DF8 476 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAR2Q96K12 515 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 KCNK4Q9NYG8 393 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 LMCD1Q9NZU5 365 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 SAE1Q9UBE0 346 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 RNF112Q9ULX5 631 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 BTBD3Q9Y2F9 522 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 KRT6BP04259 564 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 HIST1H2AGP0C0S8 130 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 ALOX15P16050 662 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 HIST1H2ADP20671 130 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 GRIK1P39086 918 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 KRT6CP48668 564 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 SERPINH1P50454 418 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 AKR1D1P51857 326 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 ULK2Q8IYT8 1036 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 GSTCDQ8NEC7 633 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 HIST1H2AHQ96KK5 128 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 HIST1H2AJQ99878 128 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 H2AFJQ9BTM1 129 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 BDH2Q9BUT1 245 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 WDR41Q9HAD4 459 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 MRPL39Q9NYK5 338 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 PLA2G4CQ9UP65 541 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 DMTF1Q9Y222 760 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 KIDINS220Q9ULH0 1771 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 DIP2CQ9Y2E4 1556 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 SHPRHQ149N8 1683 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLITRK3O94933 977 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 FDFT1P37268 417 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 MYL6P60660 151 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 DDR2Q16832 855 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 AKIRIN2Q53H80 203 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 TMEM26Q6ZUK4 368 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 KLHL31Q9H511 634 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 VIRMAQ69YN4 1812 aaKnown RBP9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 WDR27A2RRH5 827 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 DCDC2CA8MYV0 355 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 EML1O00423 815 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 ENTPD3O75355 529 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 SEC24AO95486 1093 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 ALDH6A1Q02252 535 aaKnown RBP9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 EVX2Q03828 476 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 LPIN1Q14693 890 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM98BQ52LJ0 330 aaKnown RBP9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 EGFLAMQ63HQ2 1017 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 NAPEPLDQ6IQ20 393 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 LRRC55Q6ZSA7 311 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 OR7A2PQ8NGA2 310 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM172AQ8WUF8 416 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 ATG4CQ96DT6 458 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 NSMCE2Q96MF7 247 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 C9orf16Q9BUW7 83 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 PCDH9Q9HC56 1237 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 CISHQ9NSE2 258 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 ARL8BQ9NVJ2 186 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 POLLQ9UGP5 575 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 C15orf38-AP3S2A0A0A6YYH1 394 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 PTK6Q13882 451 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms