RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 LGSNQ5TDP6 509 aa20.17■□□□□ 0.82
CDC42EP1-201ENST00000249014 MROH9Q5TGP6 573 aa20.17■□□□□ 0.82
CDC42EP1-201ENST00000249014 SPATA13Q96N96 652 aa20.17■□□□□ 0.82
CDC42EP1-201ENST00000249014 EBF2Q9HAK2 575 aa20.17■□□□□ 0.82
CDC42EP1-201ENST00000249014 CACNG4Q9UBN1 327 aa20.17■□□□□ 0.82
CDC42EP1-201ENST00000249014 MCM8Q9UJA3 840 aa20.17■□□□□ 0.82
CDC42EP1-201ENST00000249014 C2orf71A6NGG8 1288 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 PTGESO14684 152 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 DAB1O75553 588 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 ARFIP2P53365 341 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 CRADDP78560 199 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 BEX3Q00994 111 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 KIAA0319Q5VV43 1072 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 SYPL2Q5VXT5 272 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 SPRYD7Q5W111 196 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 CES4AQ5XG92 561 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 BNIPLQ7Z465 357 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 ARMC2Q8NEN0 867 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 UPF1Q92900 1129 aaKnown RBP eCLIP20.16■□□□□ 0.824e-8■■■■□ 26.6
CDC42EP1-201ENST00000249014 NT5C3BQ969T7 300 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 PRR11Q96HE9 360 aaPredicted RBP20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 TMEM120AQ9BXJ8 343 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 CEP41Q9BYV8 373 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 PIH1D1Q9NWS0 290 aaKnown RBP20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 MOCS1Q9NZB8 636 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 RCOR3Q9P2K3 495 aaPredicted RBP20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 CPA4Q9UI42 421 aa20.16■□□□□ 0.82
CDC42EP1-201ENST00000249014 WDR27A2RRH5 827 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 IQCA1LA6NCM1 817 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 HACD1B0YJ81 288 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 TRAFD1O14545 582 aaPredicted RBP20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 CYB561D2O14569 222 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 KLF11O14901 512 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 KRT38O76015 456 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 NPR3P17342 541 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 CCND1P24385 295 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 EPHB2P29323 1055 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 WSCD1Q658N2 575 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 TOP6BLQ8N6T0 577 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 PDCD7Q8N8D1 485 aaKnown RBP20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 COLGALT1Q8NBJ5 622 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 RNF139Q8WU17 664 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 ZFP42Q96MM3 310 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 NPY6RQ99463 290 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 FBXO6Q9NRD1 293 aaPredicted RBP20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 IL1BP01584 269 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 MYL3P08590 195 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 PTPN1P18031 435 aaKnown RBP20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 SERPINB3P29508 390 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 RABGGTBP53611 331 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 MORN1Q5T089 497 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 CLEC20AQ6ZU45 233 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 HFE2Q6ZVN8 426 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 SKA1Q96BD8 255 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 P2RY11Q96G91 374 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 SAR1AQ9NR31 198 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 PCMTD2Q9NV79 361 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 MKS1Q9NXB0 559 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 SLC17A6Q9P2U8 582 aa20.15■□□□□ 0.82
CDC42EP1-201ENST00000249014 M0QYT0 321 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 RNF103O00237 685 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 ANP32DO95626 131 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 TOP3BO95985 862 aaKnown RBP20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 NOS2P35228 1153 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 CRYBB1P53674 252 aaPredicted RBP20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 AP1B1Q10567 949 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 LONP2Q86WA8 852 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 TP53INP2Q8IXH6 220 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 RNF169Q8NCN4 708 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 FAM13CQ8NE31 585 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 DEPDC1BQ8WUY9 529 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 MTBPQ96DY7 904 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 TSPAN18Q96SJ8 248 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 LNPEPQ9UIQ6 1025 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 MEIS3P2A8K0S8 358 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 CREB3O43889 395 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 FDFT1P37268 417 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 RASSF2P50749 326 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 CDK16Q00536 496 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 NME3Q13232 169 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 CCL14Q16627 93 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 PSTKQ8IV42 348 aaKnown RBP20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 APBB2Q92870 758 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 PIGVQ9NUD9 493 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 ARL8BQ9NVJ2 186 aa20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 MTO1Q9Y2Z2 717 aaKnown RBP20.14■□□□□ 0.81
CDC42EP1-201ENST00000249014 FAM237BA0A1B0GVD1 139 aa20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 PTPN4P29074 926 aa20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 LRPAP1P30533 357 aa20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 BST1Q10588 318 aa20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 MAP2K5Q13163 448 aa20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 MDH1BQ5I0G3 518 aa20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 STEAP4Q687X5 459 aa20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 TWF2Q6IBS0 349 aaKnown RBP20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 NDUFAF2Q8N183 169 aa20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 KCTD13Q8WZ19 329 aa20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 PPP1R10Q96QC0 940 aaKnown RBP20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 DNAI2Q9GZS0 605 aa20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 ZNF395Q9H8N7 513 aaPredicted RBP20.13■□□□□ 0.81
CDC42EP1-201ENST00000249014 LRRC4Q9HBW1 653 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms