RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 COX16Q9P0S2 106 aa14.7□□□□□ -0.06
SDF2-201ENST00000247020 TLR6Q9Y2C9 796 aa14.7□□□□□ -0.06
SDF2-201ENST00000247020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.69□□□□□ -0.06
SDF2-201ENST00000247020 SLC38A8A6NNN8 435 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 CSH1P0DML2 217 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 CSH2P0DML3 217 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 USP46P62068 366 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 MORF4L2Q15014 288 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 SNX30Q5VWJ9 437 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 DARS2Q6PI48 645 aaKnown RBP14.69□□□□□ -0.06
SDF2-201ENST00000247020 RFX8Q6ZV50 586 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 PYROXD2Q8N2H3 581 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 GDAP1L1Q96MZ0 367 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 UBE2OQ9C0C9 1292 aaKnown RBP14.69□□□□□ -0.06
SDF2-201ENST00000247020 MTIF3Q9H2K0 278 aaKnown RBP14.69□□□□□ -0.06
SDF2-201ENST00000247020 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.69□□□□□ -0.06
SDF2-201ENST00000247020 GMIPQ9P107 970 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 SAE1Q9UBE0 346 aaPredicted RBP14.69□□□□□ -0.06
SDF2-201ENST00000247020 SLC27A5Q9Y2P5 690 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 PLXNA4Q9HCM2 1894 aa14.69□□□□□ -0.06
SDF2-201ENST00000247020 H7C0C1 242 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 DCLK1O15075 740 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 TP73O15350 636 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 ADAM12O43184 909 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 ATF6P18850 670 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 ACTN2P35609 894 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 ATP5OP48047 213 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 KPNA1P52294 538 aaPredicted RBP14.68□□□□□ -0.06
SDF2-201ENST00000247020 ITGA8P53708 1063 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 TPI1P60174 286 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 DHX9Q08211 1270 aaKnown RBP14.68□□□□□ -0.06
SDF2-201ENST00000247020 P3H1Q32P28 736 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 CFAP58Q5T655 872 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 SDHAF4Q5VUM1 108 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 IZUMO3Q5VZ72 239 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 HIBCHQ6NVY1 386 aaPredicted RBP14.68□□□□□ -0.06
SDF2-201ENST00000247020 C1orf228Q6PIY5 440 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 NPNTQ6UXI9 565 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 LRIG3Q6UXM1 1119 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 TMCO2Q7Z6W1 182 aaPredicted RBP14.68□□□□□ -0.06
SDF2-201ENST00000247020 TADA2BQ86TJ2 420 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 HOOK3Q86VS8 718 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 IQCKQ8N0W5 287 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 TSEN2Q8NCE0 465 aaKnown RBP14.68□□□□□ -0.06
SDF2-201ENST00000247020 CASP10Q92851 521 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 RNF34Q969K3 372 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 SLC39A13Q96H72 371 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 OLFM3Q96PB7 478 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 RXFP1Q9HBX9 757 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 MRPL17Q9NRX2 175 aaKnown RBP14.68□□□□□ -0.06
SDF2-201ENST00000247020 ANAPC5Q9UJX4 755 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 TPX2Q9ULW0 747 aaKnown RBP14.68□□□□□ -0.06
SDF2-201ENST00000247020 SHOC2Q9UQ13 582 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 GOLGA6BA6NDN3 693 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 NCAM2O15394 837 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 CREB3O43889 395 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 LINC00271P0C7V0 271 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 CTSAP10619 480 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 RARGP13631 454 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 AMPD1P23109 780 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 HOXC13P31276 330 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 SERPINB6P35237 376 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 TAF10Q12962 218 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 TRIP13Q15645 432 aaPredicted RBP14.68□□□□□ -0.06
SDF2-201ENST00000247020 SLC45A4Q5BKX6 768 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 RELL1Q8IUW5 271 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 UNC45BQ8IWX7 931 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 VPS52Q8N1B4 723 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 TRMT2BQ96GJ1 504 aaKnown RBP14.68□□□□□ -0.06
SDF2-201ENST00000247020 C1orf74Q96LT6 269 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 MYRFLQ96LU7 910 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 QKIQ96PU8 341 aaKnown RBP eCLIP14.68□□□□□ -0.06
SDF2-201ENST00000247020 RUFY1Q96T51 708 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 RAD9AQ99638 391 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 FERMT1Q9BQL6 677 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 BRD8Q9H0E9 1235 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 ZBP1Q9H171 429 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 OSER1Q9NX31 292 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 DTLQ9NZJ0 730 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 PAK5Q9P286 719 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 OR12D3Q9UGF7 316 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 RWDD3Q9Y3V2 267 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 HEY1Q9Y5J3 304 aa14.68□□□□□ -0.06
SDF2-201ENST00000247020 KCNU1A8MYU2 1149 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 I6L893 689 aaPredicted RBP14.67□□□□□ -0.06
SDF2-201ENST00000247020 RRP9O43818 475 aaKnown RBP14.67□□□□□ -0.06
SDF2-201ENST00000247020 LILRB3O75022 631 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 FGF18O76093 207 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 IFNB1P01574 187 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 HSD17B3P37058 310 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 PPP3CCP48454 512 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 RING1Q06587 406 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 GPS1Q13098 491 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 PDK1Q15118 436 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 TRIP4Q15650 581 aaPredicted RBP14.67□□□□□ -0.06
SDF2-201ENST00000247020 HSP90B2PQ58FF3 399 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 ZC3H18Q86VM9 953 aaKnown RBP14.67□□□□□ -0.06
SDF2-201ENST00000247020 TCEAL8Q8IYN2 117 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 ZBED2Q9BTP6 218 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 HTATIP2Q9BUP3 242 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms