RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 IARS2Q9NSE4 1012 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 DDX28Q9NUL7 540 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 CNTNAP2Q9UHC6 1331 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 ANKRD6Q9Y2G4 727 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 CES2O00748 559 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 CNOT3O75175 753 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 GCATO75600 419 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 CYP2F1P24903 491 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 NOS2P35228 1153 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 CD151P48509 253 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 RARRES1P49788 294 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 CSE1LP55060 971 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 NUP107P57740 925 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 SCARA3Q6AZY7 606 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 FBXL19Q6PCT2 694 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 SV2AQ7L0J3 742 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 CBWD2Q8IUF1 395 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 EXOSC4Q9NPD3 245 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 SNCAIPQ9Y6H5 919 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 DIP2CQ9Y2E4 1556 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 MYPNQ86TC9 1320 aa7.52□□□□□ -1.2
SSR1-201ENST00000244763 FGFR1P11362 822 aa7.52□□□□□ -1.2
SSR1-201ENST00000244763 SCNN1BP51168 640 aa7.52□□□□□ -1.2
SSR1-201ENST00000244763 SP3Q02447 781 aa7.52□□□□□ -1.2
SSR1-201ENST00000244763 GCNT1Q02742 428 aa7.52□□□□□ -1.2
SSR1-201ENST00000244763 MTF1Q14872 753 aa7.52□□□□□ -1.2
SSR1-201ENST00000244763 SMAD1Q15797 465 aaKnown RBP7.52□□□□□ -1.2
SSR1-201ENST00000244763 DEFB132Q7Z7B7 95 aa7.52□□□□□ -1.2
SSR1-201ENST00000244763 SLC26A11Q86WA9 606 aa7.52□□□□□ -1.2
SSR1-201ENST00000244763 PPP1R10Q96QC0 940 aaKnown RBP7.52□□□□□ -1.2
SSR1-201ENST00000244763 WNT10BO00744 389 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 CLTBP09497 229 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 EIF4BP23588 611 aaKnown RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 ST13P50502 369 aaKnown RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 NDST1P52848 882 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 MGAT5Q09328 741 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 DENND5BQ6ZUT9 1274 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 MICU2Q8IYU8 434 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 ACSF2Q96CM8 615 aaPredicted RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 OLFM1Q99784 485 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 RUSC1Q9BVN2 902 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 CHORDC1Q9UHD1 332 aaPredicted RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 TSPAN16Q9UKR8 245 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 AP4S1Q9Y587 144 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 PPRC1Q5VV67 1664 aaKnown RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 RPL3P39023 403 aaKnown RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 CDK7P50613 346 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 ANTXR2P58335 489 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 ACOX1Q15067 660 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 PKN1Q16512 942 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 CCDC157Q569K6 752 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 RGL4Q8IZJ4 473 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 ZNF248Q8NDW4 579 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 GPRC5CQ9NQ84 441 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 PTPRMP28827 1452 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 ADGRA3Q8IWK6 1321 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 NWD1Q149M9 1564 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 RPL9P32969 192 aaKnown RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 DEFB115Q30KQ5 88 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 FAM46CQ5VWP2 391 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 GLT6D1Q7Z4J2 308 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 UNC93AQ86WB7 457 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 PHC3Q8NDX5 983 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 USP7Q93009 1102 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 ATP13A1Q9HD20 1204 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 LRRC4BQ9NT99 713 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 NFKBIL1Q9UBC1 381 aaPredicted RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 ERI2A8K979 691 aaKnown RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 TEX28O15482 410 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 MYBL2P10244 700 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 LSP1P33241 339 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 KCNJ1P48048 391 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 NUDT2P50583 147 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 OTUD4Q01804 1114 aaKnown RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 XRCC4Q13426 336 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 NFYCQ13952 458 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 LY6KQ17RY6 165 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 OTOP1Q7RTM1 612 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 ST13P5Q8NFI4 369 aaPredicted RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 POP5Q969H6 163 aaKnown RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 PDLIM2Q96JY6 352 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 SLC39A8Q9C0K1 460 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 RBM12Q9NTZ6 932 aaKnown RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 PNMA8BQ9ULN7 279 aaPredicted RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 TNPO3Q9Y5L0 923 aaKnown RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 IQGAP1P46940 1657 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 C15orf38-AP3S2A0A0A6YYH1 394 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 LRRC14BA6NHZ5 514 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 TRDMT1O14717 391 aaKnown RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 ZBTB39O15060 712 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 RFX8Q6ZV50 586 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 ARPINQ7Z6K5 226 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 MAGEB18Q96M61 343 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 OSBPL1AQ9BXW6 950 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 ENTPD4Q9Y227 616 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 TBC1D3BA6NDS4 549 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 FKTNO75072 461 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 ENO2P09104 434 aaPredicted RBP7.52□□□□□ -1.21
SSR1-201ENST00000244763 GHRP10912 638 aa7.52□□□□□ -1.21
SSR1-201ENST00000244763 KPNB1Q14974 876 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms