RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 DENND5BQ6ZUT9 1274 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 SLC26A9Q7LBE3 791 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 APBB1IPQ7Z5R6 666 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-202ENST00000244303 PLEKHH3Q7Z736 793 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.85□□□□□ -0.03
HIF3A-202ENST00000244303 UNC5BQ8IZJ1 945 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 PYROXD2Q8N2H3 581 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 NPLOC4Q8TAT6 608 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 MCUR1Q96AQ8 359 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 C20orf27Q9GZN8 174 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 ABHD16BQ9H3Z7 469 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 PLEKHA5Q9HAU0 1116 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 XAB2Q9HCS7 855 aaKnown RBP14.85□□□□□ -0.03
HIF3A-202ENST00000244303 ARHGEF4Q9NR80 690 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 MARCOQ9UEW3 520 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-202ENST00000244303 GJD2Q9UKL4 321 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 DERAQ9Y315 318 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 VAV1P15498 845 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 GOT1P17174 413 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 CALRP27797 417 aaKnown RBP14.85□□□□□ -0.03
HIF3A-202ENST00000244303 CCNHP51946 323 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-202ENST00000244303 ZBTB6Q15916 424 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 DGKDQ16760 1214 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 NBPF20Q3BBV1 942 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 FAM91A1Q658Y4 838 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 IQSEC1Q6DN90 963 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 ZNF410Q86VK4 478 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 UNC93AQ86WB7 457 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 BEST2Q8NFU1 509 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 PTPN18Q99952 460 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 SETD4Q9NVD3 440 aa14.85□□□□□ -0.03
HIF3A-202ENST00000244303 ADCY6O43306 1168 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 SMNDC1O75940 238 aaKnown RBP eCLIP14.84□□□□□ -0.03
HIF3A-202ENST00000244303 LMO2P25791 158 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 CRHR1P34998 444 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 ABL2P42684 1182 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 CPA2P48052 419 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 SERPINB9P50453 376 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 BCAT1P54687 386 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 IRX1P78414 480 aaPredicted RBP14.84□□□□□ -0.03
HIF3A-202ENST00000244303 KPNB1Q14974 876 aaKnown RBP14.84□□□□□ -0.03
HIF3A-202ENST00000244303 ACSBG2Q5FVE4 666 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 C9orf57Q5W0N0 161 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 LRRC52Q8N7C0 313 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 ANKRD52Q8NB46 1076 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 STKLD1Q8NE28 680 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 HTR3CQ8WXA8 447 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.84□□□□□ -0.03
HIF3A-202ENST00000244303 MOCS1Q9NZB8 636 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 SLC17A6Q9P2U8 582 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 GTF2IRD1Q9UHL9 959 aa14.84□□□□□ -0.03
HIF3A-202ENST00000244303 WDR27A2RRH5 827 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 EIF4E1BA6NMX2 242 aaKnown RBP14.83□□□□□ -0.03
HIF3A-202ENST00000244303 TOMM70O94826 608 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 BPGMP07738 259 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 RARBP10826 455 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 SESN3P58005 492 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 CRADDP78560 199 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 SATB1Q01826 763 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 SLC27A1Q6PCB7 646 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 ZCCHC23Q6ZST2 131 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 TREML1Q86YW5 311 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 ADGRF2Q8IZF7 708 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 NETO2Q8NC67 525 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 TFB1MQ8WVM0 346 aaKnown RBP14.83□□□□□ -0.03
HIF3A-202ENST00000244303 PARK7Q99497 189 aaKnown RBP14.83□□□□□ -0.03
HIF3A-202ENST00000244303 LGMNQ99538 433 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 FAM49AQ9H0Q0 323 aaPredicted RBP14.83□□□□□ -0.03
HIF3A-202ENST00000244303 USP3Q9Y6I4 520 aa14.83□□□□□ -0.03
HIF3A-202ENST00000244303 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.83□□□□□ -0.04
HIF3A-202ENST00000244303 CAPN14A8MX76 684 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 SNNO75324 88 aaPredicted RBP14.83□□□□□ -0.04
HIF3A-202ENST00000244303 DGKIO75912 1065 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 ENO1P06733 434 aaKnown RBP14.83□□□□□ -0.04
HIF3A-202ENST00000244303 AQP5P55064 265 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 IRX4P78413 519 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 RCN1Q15293 331 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 GPR162Q16538 588 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 FAM110CQ1W6H9 321 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 MDH1BQ5I0G3 518 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 SPRYD7Q5W111 196 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 CASC4Q6P4E1 433 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 CATSPER4Q7RTX7 472 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 FAM131BQ86XD5 332 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 CRLF3Q8IUI8 442 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 TEX9Q8N6V9 391 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 WDR60Q8WVS4 1066 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 KBTBD7Q8WVZ9 684 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 OLFM3Q96PB7 478 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 LBHD1Q9BQE6 289 aaPredicted RBP14.83□□□□□ -0.04
HIF3A-202ENST00000244303 APOL6Q9BWW8 343 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 GCOM2Q9BZD3 368 aaPredicted RBP14.83□□□□□ -0.04
HIF3A-202ENST00000244303 ADAMTS10Q9H324 1103 aa14.83□□□□□ -0.04
HIF3A-202ENST00000244303 NXF3Q9H4D5 531 aaKnown RBP14.83□□□□□ -0.04
HIF3A-202ENST00000244303 PIH1D1Q9NWS0 290 aaKnown RBP14.83□□□□□ -0.04
HIF3A-202ENST00000244303 PPARGC1AQ9UBK2 798 aaKnown RBP14.83□□□□□ -0.04
HIF3A-202ENST00000244303 MFSD11O43934 449 aa14.82□□□□□ -0.04
HIF3A-202ENST00000244303 KRT36O76013 467 aa14.82□□□□□ -0.04
HIF3A-202ENST00000244303 FKBP1BP68106 108 aa14.82□□□□□ -0.04
HIF3A-202ENST00000244303 SARNPP82979 210 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms