RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 TOR1BO14657 336 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 NECAB2Q7Z6G3 386 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 NT5C1AQ9BXI3 368 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 LRCH1Q9Y2L9 728 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 VAPBO95292 243 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 PIRTP0C851 137 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 CREB1P16220 341 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 TAP1Q03518 808 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 TMEM63BQ5T3F8 832 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 RNPEPL1Q9HAU8 725 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 ARHGEF3Q9NR81 526 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 CIDEBQ9UHD4 219 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 USP18Q9UMW8 372 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 RFX7Q2KHR2 1363 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 MTFR1Q15390 333 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 FAM83EQ2M2I3 478 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 C10orf120Q5SQS8 335 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 MID1IP1Q9NPA3 183 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 DPP3Q9NY33 737 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 AP4E1Q9UPM8 1137 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 UBDO15205 165 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 PSIP1O75475 530 aaKnown RBP7.7□□□□□ -1.18
RIF1-201ENST00000243326 COL9A2Q14055 689 aaPredicted RBP7.7□□□□□ -1.18
RIF1-201ENST00000243326 TFDP3Q5H9I0 405 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 FAR1Q8WVX9 515 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 APBA2Q99767 749 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 OGDHLQ9ULD0 1010 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 GLRA3O75311 464 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 CYP2F1P24903 491 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 NFIAQ12857 509 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 COX10Q12887 443 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 DHFR2Q86XF0 187 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 PHC3Q8NDX5 983 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 MED8Q96G25 268 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 LCA5LO95447 670 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 IL17RBQ9NRM6 502 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 GTF3C4Q9UKN8 822 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 EFR3BQ9Y2G0 817 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 SLC30A1Q9Y6M5 507 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 CCNT2O60583 730 aaKnown RBP7.7□□□□□ -1.18
RIF1-201ENST00000243326 TIPRLO75663 272 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 KYQ8NBH2 561 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 FAM81AQ8TBF8 368 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 ANKRD27Q96NW4 1050 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 RASSF9O75901 435 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 RBL1P28749 1068 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 C1orf50Q9BV19 199 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 ABCA8O94911 1581 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 MAP3K13O43283 966 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 HMGCRP04035 888 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 ECM1Q16610 540 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 TRMT5Q32P41 509 aaKnown RBP7.7□□□□□ -1.18
RIF1-201ENST00000243326 PRR23CQ6ZRP0 262 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 TMEM26Q6ZUK4 368 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 TBC1D16Q8TBP0 767 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 FAM120BQ96EK7 910 aaKnown RBP7.7□□□□□ -1.18
RIF1-201ENST00000243326 CISHQ9NSE2 258 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 H2AFY2Q9P0M6 372 aaPredicted RBP7.7□□□□□ -1.18
RIF1-201ENST00000243326 ATP6AP2A0A1C7CYW4 349 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 TADA2AO75478 443 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 ATP6AP2O75787 350 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 CCT8P50990 548 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 FGD2Q7Z6J4 655 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 CLIP4Q8N3C7 705 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 DNAJB14Q8TBM8 379 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 ATXN2LQ8WWM7 1075 aaKnown RBP7.7□□□□□ -1.18
RIF1-201ENST00000243326 LRRC39Q96DD0 335 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 WDR41Q9HAD4 459 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.7□□□□□ -1.181e-6■□□□□ 10.7
RIF1-201ENST00000243326 RAD51BO15315 384 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 HSD17B4P51659 736 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 USP46P62068 366 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 PLCL1Q15111 1095 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 ZNF333Q96JL9 665 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 SLC4A5Q9BY07 1137 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 STAU1O95793 577 aaKnown RBP7.7□□□□□ -1.18
RIF1-201ENST00000243326 CXCL8P10145 99 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 CDH2P19022 906 aaPredicted RBP7.7□□□□□ -1.18
RIF1-201ENST00000243326 WEE1P30291 646 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 ZC3H12AQ5D1E8 599 aaKnown RBP7.7□□□□□ -1.18
RIF1-201ENST00000243326 LRRC8DQ7L1W4 858 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 SYN2Q92777 582 aaPredicted RBP7.7□□□□□ -1.18
RIF1-201ENST00000243326 PGLYRP2Q96PD5 576 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 YME1L1Q96TA2 773 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 COG5Q9UP83 839 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 OR1G1P47890 313 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 ASAP3Q8TDY4 903 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 MXRA8Q9BRK3 442 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 ACAD9Q9H845 621 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 KBTBD4Q9NVX7 518 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 TRIOBPQ9H2D6 2365 aa7.7□□□□□ -1.18
RIF1-201ENST00000243326 PRR5-ARHGAP8B1AHC4 643 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 TAS2R40P59535 323 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 ARHGAP8P85298 464 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 ZFPM1Q8IX07 1006 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 FAM13CQ8NE31 585 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 SPPL2AQ8TCT8 520 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 CDCA7Q9BWT1 371 aaPredicted RBP7.69□□□□□ -1.18
RIF1-201ENST00000243326 AP4S1Q9Y587 144 aa7.69□□□□□ -1.18
RIF1-201ENST00000243326 MYOCOSA0A1B0GUC4 107 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms