RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 GRSF1Q12849 480 aaKnown RBP eCLIP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 FZD5Q13467 585 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 DHCR24Q15392 516 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 TRIP4Q15650 581 aaPredicted RBP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 CLEC16AQ2KHT3 1053 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 DCAF6Q58WW2 860 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 FAM102AQ5T9C2 384 aaPredicted RBP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 TRIM68Q6AZZ1 485 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 OLFML1Q6UWY5 402 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 FAM183BPQ6ZVS7 135 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 SND1Q7KZF4 910 aaKnown RBP eCLIP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 ARCQ7LC44 396 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 PHF13Q86YI8 300 aaPredicted RBP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 VSTM4Q8IW00 320 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 DRC7Q8IY82 874 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 CLEC4CQ8WTT0 213 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 IER2Q9BTL4 223 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 IRX2Q9BZI1 471 aaPredicted RBP11.75□□□□□ -0.53
SF3B6-201ENST00000233468 LINC00597Q9H2U6 94 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 HAUS4Q9H6D7 363 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 LTB4R2Q9NPC1 389 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 HPS4Q9NQG7 708 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 ADAM22Q9P0K1 906 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 SFMBT1Q9UHJ3 866 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 TLR6Q9Y2C9 796 aa11.75□□□□□ -0.53
SF3B6-201ENST00000233468 KIF26AQ9ULI4 1882 aaPredicted RBP11.74□□□□□ -0.53
SF3B6-201ENST00000233468 RALGAPA1Q6GYQ0 2036 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 LAMTOR5O43504 91 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 DAB1O75553 588 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 F9P00740 461 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 APOEP02649 317 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 HMBSP08397 361 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 ADH5P11766 374 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 GZMAP12544 262 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 ARSAP15289 507 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 DRD1P21728 446 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 GJA4P35212 333 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 EIF2DP41214 584 aaKnown RBP11.74□□□□□ -0.53
SF3B6-201ENST00000233468 MATKP42679 507 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 DGKKQ5KSL6 1271 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 ACBD5Q5T8D3 534 aaPredicted RBP11.74□□□□□ -0.53
SF3B6-201ENST00000233468 ACAD10Q6JQN1 1059 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 ZC3H14Q6PJT7 736 aaKnown RBP11.74□□□□□ -0.53
SF3B6-201ENST00000233468 MMS22LQ6ZRQ5 1243 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 XYLT1Q86Y38 959 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 BBS7Q8IWZ6 715 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 DEFB106AQ8N104 65 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 SYNPOQ8N3V7 929 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 TTC8Q8TAM2 541 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 RIN3Q8TB24 985 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 DQX1Q8TE96 717 aaKnown RBP11.74□□□□□ -0.53
SF3B6-201ENST00000233468 RUBCNQ92622 972 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 RNF34Q969K3 372 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 AZIN2Q96A70 460 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 TRIM11Q96F44 468 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 VCPIP1Q96JH7 1222 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 SLC2A13Q96QE2 648 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 XPO6Q96QU8 1125 aaKnown RBP11.74□□□□□ -0.53
SF3B6-201ENST00000233468 FAM204AQ9H8W3 233 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 SPHK2Q9NRA0 654 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.74□□□□□ -0.53
SF3B6-201ENST00000233468 NAALADL1Q9UQQ1 740 aa11.74□□□□□ -0.53
SF3B6-201ENST00000233468 TYW5A2RUC4 315 aaKnown RBP11.73□□□□□ -0.53
SF3B6-201ENST00000233468 TRDMT1O14717 391 aaKnown RBP11.73□□□□□ -0.53
SF3B6-201ENST00000233468 IRAK2O43187 625 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 TRUB2O95900 331 aaKnown RBP11.73□□□□□ -0.53
SF3B6-201ENST00000233468 GYPCP04921 128 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 ABCB4P21439 1286 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 PTPRDP23468 1912 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 CASP14P31944 242 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 CCR1P32246 355 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 GSCP56915 257 aaPredicted RBP11.73□□□□□ -0.53
SF3B6-201ENST00000233468 RNASE9P60153 205 aaKnown RBP11.73□□□□□ -0.53
SF3B6-201ENST00000233468 E2F5Q15329 346 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 ANO4Q32M45 955 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 FBXO43Q4G163 708 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 Q6ZNB5 142 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 DGLUCYQ7Z3D6 616 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 DENND1CQ8IV53 801 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 CNGA4Q8IV77 575 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 CPXM2Q8N436 756 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 ZNF557Q8N988 423 aaPredicted RBP11.73□□□□□ -0.53
SF3B6-201ENST00000233468 OR8K1Q8NGG5 319 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 SLC30A5Q8TAD4 765 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 CD101Q93033 1021 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 PCDHB18PQ96TA0 734 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 P2RY13Q9BPV8 354 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 C11orf70Q9BRQ4 267 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.73□□□□□ -0.53
SF3B6-201ENST00000233468 SELENOOQ9BVL4 669 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 RBSNQ9H1K0 784 aa11.73□□□□□ -0.53
SF3B6-201ENST00000233468 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.73□□□□□ -0.53
SF3B6-201ENST00000233468 AGO1Q9UL18 857 aaKnown RBP11.73□□□□□ -0.53
SF3B6-201ENST00000233468 NDRG2Q9UN36 371 aaKnown RBP11.73□□□□□ -0.53
SF3B6-201ENST00000233468 GOLGA8SH3BPF8 625 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 HOXC11O43248 304 aaPredicted RBP11.72□□□□□ -0.53
SF3B6-201ENST00000233468 GREM1O60565 184 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 GRAP2O75791 330 aa11.72□□□□□ -0.53
SF3B6-201ENST00000233468 CYP17A1P05093 508 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms