RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 MRPL17Q9NRX2 175 aaKnown RBP11.37□□□□□ -0.59
KNOP1-201ENST00000219837 SOX13Q9UN79 622 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 TRPV2Q9Y5S1 764 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 ZNF839A8K0R7 811 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 KLHL41O60662 606 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 CTDNEP1O95476 244 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 UMPSP11172 480 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 MAGEA10P43363 369 aaPredicted RBP11.37□□□□□ -0.59
KNOP1-201ENST00000219837 PSEN2P49810 448 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 NDST1P52848 882 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 USP49Q70CQ1 688 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 NECAB2Q7Z6G3 386 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 OR8H2Q8N162 312 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 EMC1Q8N766 993 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 TRPC4APQ8TEL6 797 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 USP6NLQ92738 828 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 TMEM159Q96B96 161 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 BCL2L14Q9BZR8 327 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 ATP13A1Q9HD20 1204 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 ARHGEF3Q9NR81 526 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 EVA1BQ9NVM1 165 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 AKAP7Q9P0M2 348 aaPredicted RBP11.37□□□□□ -0.59
KNOP1-201ENST00000219837 SNX13Q9Y5W8 968 aa11.37□□□□□ -0.59
KNOP1-201ENST00000219837 CES2O00748 559 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 RBP1P09455 135 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 BGNP21810 368 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 FMO4P31512 558 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 LSP1P33241 339 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 VAC14Q08AM6 782 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 SLC30A10Q6XR72 485 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 BNIPLQ7Z465 357 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 TXNRD3Q86VQ6 643 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 CCNJLQ8IV13 435 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 SOCS4Q8WXH5 440 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 PHF21BQ96EK2 531 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 WDR41Q9HAD4 459 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 RGS18Q9NS28 235 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 FZD1Q9UP38 647 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 GPSM3Q9Y4H4 160 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 BAIAP3O94812 1187 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 DDNO94850 711 aaPredicted RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 CNTFP26441 200 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 PPP2R1BP30154 601 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 ALDH5A1P51649 535 aaPredicted RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 TYW3Q6IPR3 259 aaKnown RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 FAM120BQ96EK7 910 aaKnown RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 PRRG3Q9BZD7 231 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 RSPH9Q9H1X1 276 aaPredicted RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 PIH1D1Q9NWS0 290 aaKnown RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 SLC9A8Q9Y2E8 581 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 POLR1DQ9Y2S0 133 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 PPRC1Q5VV67 1664 aaKnown RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 RPN2P04844 631 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 IL1R1P14778 569 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 SERPINB3P29508 390 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 SLC1A6P48664 564 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 NOL9Q5SY16 702 aaKnown RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 METTL7BQ6UX53 244 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 PAFAH2Q99487 392 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 ACTR8Q9H981 624 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 HAO1Q9UJM8 370 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 CCDC154A6NI56 674 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 CCT8L1PA6NM43 557 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 LACTBL1A8MY62 500 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 TRIM13O60858 407 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 TPBGLP0DKB5 382 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 JAK1P23458 1154 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 KLC1Q07866 573 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 GJC2Q5T442 439 aaPredicted RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 PALB2Q86YC2 1186 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 SH3GL3Q99963 347 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 ZNF518BQ9C0D4 1074 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 MTFR1LQ9H019 292 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 RBM22Q9NW64 420 aaKnown RBP eCLIP11.36□□□□□ -0.593e-6■□□□□ 8.7
KNOP1-201ENST00000219837 DUSP12Q9UNI6 340 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 FAM220BPB1ANY3 271 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 USP17L7P0C7H9 530 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 FLT3P36888 993 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 HPCAL1P37235 193 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 NR6A1Q15406 480 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 DEFB132Q7Z7B7 95 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 SUGP1Q8IWZ8 645 aaKnown RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 FAM9CQ8IZT9 166 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 RNASE11Q8TAA1 199 aaKnown RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 C19orf60Q96EN9 201 aa11.36□□□□□ -0.59
KNOP1-201ENST00000219837 TRIT1Q9H3H1 467 aaKnown RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 AVENQ9NQS1 362 aaPredicted RBP11.36□□□□□ -0.59
KNOP1-201ENST00000219837 A0A087X0T9 212 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 RAMP2O60895 175 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 KRT75O95678 551 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 HLA-DQA2P01906 255 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 VIL1P09327 827 aaKnown RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 INSRRP14616 1297 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 TYMPP19971 482 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 ILDR2Q71H61 639 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 ATG16L2Q8NAA4 619 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 ADAM32Q8TC27 787 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 ANKS1AQ92625 1134 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 C1QTNF7Q9BXJ2 289 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms