RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SYBUQ9NX95 663 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 SNTG2Q9NY99 539 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 UBP1Q9NZI7 540 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 MROH7Q68CQ1 1323 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 CXCL11O14625 94 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 FASP25445 335 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 PPP2R1BP30154 601 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 CCT8P50990 548 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 GRIK4Q16099 956 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 WASHC2DQ5SRD0 308 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 NBPF12Q5TAG4 269 aaPredicted RBP13.89□□□□□ -0.19
SF3A1-201ENST00000215793 ATG16L2Q8NAA4 619 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 MTERF3Q96E29 417 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 UTP6Q9NYH9 597 aaKnown RBP13.89□□□□□ -0.19
SF3A1-201ENST00000215793 SALL3Q9BXA9 1300 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 UBXN8O00124 270 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 CPSF4O95639 269 aaKnown RBP13.89□□□□□ -0.19
SF3A1-201ENST00000215793 KRT75O95678 551 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 PECAM1P16284 738 aaPredicted RBP13.89□□□□□ -0.19
SF3A1-201ENST00000215793 ZNF7P17097 686 aaPredicted RBP13.89□□□□□ -0.19
SF3A1-201ENST00000215793 TBX4P57082 545 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 TGFB2P61812 414 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 CXCL9Q07325 125 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 NAB1Q13506 487 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 ARHGAP17Q68EM7 881 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 KCNMB4Q86W47 210 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 PHACTR4Q8IZ21 702 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 USP6NLQ92738 828 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 LRRC39Q96DD0 335 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 DPY30Q9C005 99 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 NMRAL1Q9HBL8 299 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 KLHL28Q9NXS3 571 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 FAM153AQ9UHL3 310 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 RGL2O15211 777 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 CYP1A1P04798 512 aaPredicted RBP13.89□□□□□ -0.19
SF3A1-201ENST00000215793 ZCCHC18P0CG32 403 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 POU1F1P28069 291 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 CEP78Q5JTW2 689 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 CCDC103Q8IW40 242 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 TCP10LQ8TDR4 215 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 SMARCD1Q96GM5 515 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 DMAP1Q9NPF5 467 aaPredicted RBP13.89□□□□□ -0.19
SF3A1-201ENST00000215793 SETD4Q9NVD3 440 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 TAS2R13Q9NYV9 303 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 ERCC6L2Q5T890 1561 aa13.89□□□□□ -0.19
SF3A1-201ENST00000215793 PRR23AA6NEV1 266 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 DDX3XO00571 662 aaKnown RBP eCLIP13.88□□□□□ -0.194e-8■■■■□ 21.7
SF3A1-201ENST00000215793 HMGCRP04035 888 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 EIF2S1P05198 315 aaKnown RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 SLC1A6P48664 564 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 NT5DC3Q86UY8 548 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 OSCP1Q8WVF1 389 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 PGM2Q96G03 612 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 NSMCE2Q96MF7 247 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 CPNE1Q99829 537 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 DUSP9Q99956 384 aaKnown RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 CIPCQ9C0C6 399 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 MIEF1Q9NQG6 463 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 IL17RBQ9NRM6 502 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 CNTNAP2Q9UHC6 1331 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 CASTOR2A6NHX0 329 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 RARAP10276 462 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 ADIGQ0VDE8 80 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 TRAF2Q12933 501 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 C1DQ13901 141 aaKnown RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 OASLQ15646 514 aaKnown RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 FAM98BQ52LJ0 330 aaKnown RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 SPDYCQ5MJ68 293 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 TBCELQ5QJ74 424 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 ANKS6Q68DC2 871 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 TRAF7Q6Q0C0 670 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 IZUMO2Q6UXV1 221 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 ZNF410Q86VK4 478 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 EIF1ADQ8N9N8 165 aaKnown RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 ACOX2Q99424 681 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 KCTD14Q9BQ13 255 aaPredicted RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 GBA2Q9HCG7 927 aaPredicted RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 VTA1Q9NP79 307 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 FAM86B1E9PN63 330 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 RAD51BO15315 384 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 FAM86B2P0C5J1 330 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 RPL21P46778 160 aaKnown RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 RPS7P62081 194 aaKnown RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 AMPD2Q01433 879 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 VAC14Q08AM6 782 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 MFSD7Q6UXD7 560 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 ZNF438Q7Z4V0 828 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 C11orf74Q86VG3 221 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 MAP4K3Q8IVH8 894 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 FBXO39Q8N4B4 442 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 GLMNQ92990 594 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 YME1L1Q96TA2 773 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 CAPN10Q9HC96 672 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 STARD7Q9NQZ5 370 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 CROTQ9UKG9 612 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 PADI4Q9UM07 663 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 ANKRD6Q9Y2G4 727 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 E9PCH4 1651 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 A0A096LPK6 155 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 H3BQF6 201 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms