RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 TMEM191BP0C7N4 346 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 MYL4P12829 197 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 CPA3P15088 417 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 RARRES1P49788 294 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 PERM1Q5SV97 790 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 DSELQ8IZU8 1212 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 SLC35B2Q8TB61 432 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 TMC2Q8TDI7 906 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 TFB1MQ8WVM0 346 aaKnown RBP10.35□□□□□ -0.75
CLDN18-201ENST00000183605 PLEKHA8Q96JA3 519 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 MARK4Q96L34 752 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 C20orf27Q9GZN8 174 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 WDR55Q9H6Y2 383 aaPredicted RBP10.35□□□□□ -0.75
CLDN18-201ENST00000183605 COQ10BQ9H8M1 238 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 DDX4Q9NQI0 724 aaKnown RBP10.35□□□□□ -0.75
CLDN18-201ENST00000183605 PNPLA3Q9NST1 481 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 ATAD3AQ9NVI7 634 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 PIH1D1Q9NWS0 290 aaKnown RBP10.35□□□□□ -0.75
CLDN18-201ENST00000183605 ATP11BQ9Y2G3 1177 aa10.35□□□□□ -0.75
CLDN18-201ENST00000183605 FUOMA2VDF0 154 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 LRRIQ4A6NIV6 560 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 K7EPI3 171 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 PRPSAP2O60256 369 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ZNF23P17027 643 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 UGT1A6P19224 532 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 TFE3P19532 575 aaPredicted RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 UGT1A1P22309 533 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 UGT1A4P22310 534 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ACAT1P24752 427 aaKnown RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 UGT1A3P35503 534 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 UGT1A5P35504 534 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 BCAP31P51572 246 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 SHROOM1Q2M3G4 852 aaPredicted RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 CENPSQ8N2Z9 138 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 CCNYL1Q8N7R7 359 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 COG4Q9H9E3 785 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 NGRNQ9NPE2 291 aaKnown RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ACSS2Q9NR19 701 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 TBC1D22BQ9NU19 505 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 TMED5Q9Y3A6 229 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 FARP1Q9Y4F1 1045 aaPredicted RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 A0A1B0GTW7 788 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 TESPA1A2RU30 521 aaPredicted RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 KPNA7A9QM74 516 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 H3BNX3 289 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 GSTT2P0CG29 244 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 GSTT2BP0CG30 244 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 P4HA1P13674 534 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 TSHRP16473 764 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 PAX3P23760 479 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 CRHR1P34998 444 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 NPTX2P47972 431 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 EMP3P54852 163 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ABCE1P61221 599 aaKnown RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 CDKL1Q00532 357 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 BNIP3Q12983 259 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 GRAPQ13588 217 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 THOC7Q6I9Y2 204 aaKnown RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 TRMT10BQ6PF06 316 aaKnown RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 KIAA2013Q8IYS2 634 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 TNS4Q8IZW8 715 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 PCDH20Q8N6Y1 951 aaKnown RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 GRAPLQ8TC17 118 aaPredicted RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ATP6V0A1Q93050 837 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 C12orf43Q96C57 262 aaKnown RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 RTKNQ9BST9 563 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 DHX35Q9H5Z1 703 aaKnown RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 POLR1BQ9H9Y6 1135 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 SQORQ9Y6N5 450 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 STX16-NPEPL1H3BU86 382 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 CNOT3O75175 753 aaKnown RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 GH2P01242 217 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 CD48P09326 243 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 CSH1P0DML2 217 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 CSH2P0DML3 217 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ZNF12P17014 697 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ATP2B4P23634 1241 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 KDELR1P24390 212 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 TBXAS1P24557 533 aaPredicted RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 NLRP11P59045 1033 aaKnown RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 DOK7Q18PE1 504 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 LRRC38Q5VT99 294 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ZNF772Q68DY9 489 aaPredicted RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 Q6ZNX1 250 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 BBS12Q6ZW61 710 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 TDRD5Q8NAT2 981 aaKnown RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 DEPTORQ8TB45 409 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ATP6V1E2Q96A05 226 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ZNF512Q96ME7 567 aaPredicted RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 OSBPL11Q9BXB4 747 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 CXorf21Q9HAI6 301 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 TUBA8Q9NY65 449 aaPredicted RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 RBAKQ9NYW8 714 aaPredicted RBP10.34□□□□□ -0.75
CLDN18-201ENST00000183605 SEPT10Q9P0V9 454 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 EBF1Q9UH73 591 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 PRR12Q9ULL5 1215 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 ZNF536O15090 1300 aa10.34□□□□□ -0.75
CLDN18-201ENST00000183605 A0A1W2PPW3 197 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms