RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 SSX2IPQ9Y2D8 614 aa20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 COL16A1Q07092 1604 aaPredicted RBP20.69■□□□□ 0.9
PPP1R3F-201ENST00000055335 SF3B1O75533 1304 aaKnown RBP eCLIP20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 ARRB2P32121 409 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 ZNF132P52740 706 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 TGFB2P61812 414 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 TUBB3Q13509 450 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 HSP90AA5PQ58FG0 334 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 SNX32Q86XE0 403 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 XYLT1Q86Y38 959 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 PLD5Q8N7P1 536 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 NIPA2Q8N8Q9 360 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 KCNK16Q96T55 309 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 NRDE2Q9H7Z3 1164 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 COG4Q9H9E3 785 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 CSPG5O95196 566 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 CLDN10P78369 228 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 SLC9B1Q4ZJI4 515 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 CMASQ8NFW8 434 aaPredicted RBP20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 A0A0J9YVX5 310 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 H3BNX3 289 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 APOL1O14791 398 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 PPIDQ08752 370 aaKnown RBP20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 DBN1Q16643 649 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 ZNF781Q8N8C0 355 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 TMA16Q96EY4 203 aaKnown RBP20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 DHX35Q9H5Z1 703 aaKnown RBP20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 RNF146Q9NTX7 359 aa20.68■□□□□ 0.9
PPP1R3F-201ENST00000055335 CCDC78A2IDD5 438 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 ADCY6O43306 1168 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 IL1BP01584 269 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 SH3BGRP55822 239 aaPredicted RBP20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 PPP1R16BQ96T49 567 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 ITGA11Q9UKX5 1188 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 C1QAP02745 245 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 ALDOAP04075 364 aaKnown RBP20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 SERPINE1P05121 402 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 PGGT1BP53609 377 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 CA9Q16790 459 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 ADGRG6Q86SQ4 1221 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 TWNKQ96RR1 684 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 ZNF518BQ9C0D4 1074 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 CAAP1Q9H8G2 361 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 ZNF180Q9UJW8 692 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 EFR3BQ9Y2G0 817 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 FIS1Q9Y3D6 152 aa20.67■□□□□ 0.9
PPP1R3F-201ENST00000055335 H0YCG3 227 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 SUPT3HO75486 399 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 ERVK-10P10266 1014 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 TSHRP16473 764 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 XRCC1P18887 633 aaPredicted RBP20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 PRKCHP24723 683 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 MLH1P40692 756 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 GRM2Q14416 872 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 ARCQ7LC44 396 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 ZBTB46Q86UZ6 589 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 BHLHE22Q8NFJ8 381 aaPredicted RBP20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 RNF157Q96PX1 679 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 OR52B2Q96RD2 323 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 EBNA1BP2Q99848 306 aaKnown RBP20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 XPNPEP3Q9NQH7 507 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 NDUFA13Q9P0J0 144 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 ZNF70Q9UC06 446 aaPredicted RBP20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 EMCNQ9ULC0 261 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 COL24A1Q17RW2 1714 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 PLIN3O60664 434 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 CDK4P11802 303 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 EPHA3P29320 983 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 THOP1P52888 689 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 KLF10Q13118 480 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 TMEM259Q4ZIN3 620 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 KLC3Q6P597 504 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 PGM2L1Q6PCE3 622 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 CNTN6Q9UQ52 1028 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 FOCADQ5VW36 1801 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 TRDMT1O14717 391 aaKnown RBP20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 BIRC5O15392 142 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 PENKP01210 267 aaPredicted RBP20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 CCND2P30279 289 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 GABRB2P47870 512 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 GBE1Q04446 702 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 SNAPC2Q13487 334 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 PCLAFQ15004 111 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 LRRC8BQ6P9F7 803 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 CNKSR2Q8WXI2 1034 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 PSMD13Q9UNM6 376 aa20.66■□□□□ 0.9
PPP1R3F-201ENST00000055335 MMP10P09238 476 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 CCR10P46092 362 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 MYBPC1Q00872 1141 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 TMEM62Q0P6H9 643 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 KBTBD6Q86V97 674 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 CCT7Q99832 543 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 FRMD8P1Q9BZ68 369 aaPredicted RBP20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 UNKQ9C0B0 810 aaKnown RBP20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 GREB1LQ9C091 1923 aaPredicted RBP20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 FOXD2O60548 495 aaPredicted RBP20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 CHRNA5P30532 468 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 ABCE1P61221 599 aaKnown RBP20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 MAPK15Q8TD08 544 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 TMIGD2Q96BF3 282 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms