RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 SPDYCQ5MJ68 293 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 WDR59Q6PJI9 974 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 DSG4Q86SJ6 1040 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 TRIM69Q86WT6 500 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 CELF6Q96J87 481 aaKnown RBP23.74■■□□□ 1.39
TARBP1-201ENST00000040877 SIK3Q9Y2K2 1263 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 DISP2A7MBM2 1401 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.74■■□□□ 1.39
TARBP1-201ENST00000040877 PYGMP11217 842 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 GLRBP48167 497 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 IKBKEQ14164 716 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 CSHL1Q14406 222 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 CASP10Q92851 521 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 TLR10Q9BXR5 811 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 DNAJC16Q9Y2G8 782 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 ENDOD1O94919 500 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 EPB42P16452 691 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 PHKG1Q16816 387 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 GAD1Q99259 594 aa23.74■■□□□ 1.39
TARBP1-201ENST00000040877 YBX3P16989 372 aaKnown RBP eCLIP23.73■■□□□ 1.39
TARBP1-201ENST00000040877 ELK3P41970 407 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 LRRC36Q1X8D7 754 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 C18orf25Q96B23 403 aaPredicted RBP23.73■■□□□ 1.39
TARBP1-201ENST00000040877 PHF21AQ96BD5 680 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 RIPK2O43353 540 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 BTKQ06187 659 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 MAP2K5Q13163 448 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 KIF2BQ8N4N8 673 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 EIF1ADQ8N9N8 165 aaKnown RBP23.73■■□□□ 1.39
TARBP1-201ENST00000040877 TMEM161BQ8NDZ6 487 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 DPF3Q92784 378 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 WNT8BQ93098 351 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 CPNE1Q99829 537 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 FAM153AQ9UHL3 310 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 ANKRD6Q9Y2G4 727 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 TRIM17Q9Y577 477 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 SPATA31C2B4DYI2 1134 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 IFRD1O00458 451 aaPredicted RBP23.73■■□□□ 1.39
TARBP1-201ENST00000040877 DEAF1O75398 565 aaPredicted RBP23.73■■□□□ 1.39
TARBP1-201ENST00000040877 KRT6AP02538 564 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 ALBP02768 609 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 KRT6BP04259 564 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 AMPD1P23109 780 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 KRT6CP48668 564 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 SLC39A12Q504Y0 691 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 FTHL17Q9BXU8 183 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 ELOVL6Q9H5J4 265 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 POLG2Q9UHN1 485 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 ZNF711Q9Y462 761 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 E5RJQ4 531 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 IFNA14P01570 189 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 CALB2P22676 271 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 CSTF3Q12996 717 aaKnown RBP23.73■■□□□ 1.39
TARBP1-201ENST00000040877 CYLC2Q14093 348 aaPredicted RBP23.73■■□□□ 1.39
TARBP1-201ENST00000040877 PTAR1Q7Z6K3 402 aaPredicted RBP23.73■■□□□ 1.39
TARBP1-201ENST00000040877 EPS8L1Q8TE68 723 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 THAP11Q96EK4 314 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 CAMKK2Q96RR4 588 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 SEPT3Q9UH03 358 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 C2CD2Q9Y426 696 aa23.73■■□□□ 1.39
TARBP1-201ENST00000040877 RNF103O00237 685 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 PTPN1P18031 435 aaKnown RBP23.72■■□□□ 1.39
TARBP1-201ENST00000040877 PEX5P50542 639 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 CREMQ03060 361 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 TATDN1Q6P1N9 297 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 ATXN3LQ9H3M9 355 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 SLC40A1Q9NP59 571 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 PRR23AA6NEV1 266 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 SIGLEC16A6NMB1 481 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 DYRK3O43781 588 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 RARAP10276 462 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 CPA2P48052 419 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 MRPS6P82932 125 aaKnown RBP23.72■■□□□ 1.39
TARBP1-201ENST00000040877 PRKAA1Q13131 559 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 POU6F1Q14863 301 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 SCARA3Q6AZY7 606 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 KCNMB4Q86W47 210 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 B4GALNT2Q8NHY0 566 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 DTNBP1Q96EV8 351 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 NMRAL1Q9HBL8 299 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 NAALADL1Q9UQQ1 740 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 VHLP40337 213 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 ERFP50548 548 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 MGAT4DA6NG13 374 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 CYP2A7P20853 494 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 CDK16Q00536 496 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 GRIK5Q16478 980 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 TJAP1Q5JTD0 557 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 BNC2Q6ZN30 1099 aaPredicted RBP23.72■■□□□ 1.39
TARBP1-201ENST00000040877 PHACTR4Q8IZ21 702 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 SIKE1Q9BRV8 207 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 PCDHGC5Q9Y5F6 944 aa23.72■■□□□ 1.39
TARBP1-201ENST00000040877 NCF1BA6NI72 391 aaPredicted RBP23.71■■□□□ 1.39
TARBP1-201ENST00000040877 NCF1CA8MVU1 366 aaPredicted RBP23.71■■□□□ 1.39
TARBP1-201ENST00000040877 TRDMT1O14717 391 aaKnown RBP23.71■■□□□ 1.39
TARBP1-201ENST00000040877 ADCY6O43306 1168 aa23.71■■□□□ 1.39
TARBP1-201ENST00000040877 CYP2A6P11509 494 aaPredicted RBP23.71■■□□□ 1.39
TARBP1-201ENST00000040877 NCF1P14598 390 aaPredicted RBP23.71■■□□□ 1.39
TARBP1-201ENST00000040877 MSH3P20585 1137 aa23.71■■□□□ 1.39
TARBP1-201ENST00000040877 PCYT1AP49585 367 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms