RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 CtssO70370 340 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Bard1O70445 765 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Avpr2O88721 371 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Grik2P39087 908 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Pla2g4aP47713 748 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Gtf2bP62915 316 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Wbp2P97765 261 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Pi4k2aQ2TBE6 479 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Nhej1Q3KNJ2 295 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Rnf10Q3UIW5 804 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Tcf12Q61286 706 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 FdxrQ61578 494 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Sin3bQ62141 1098 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Ddx3xQ62167 662 aaKnown RBP9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Fnip1Q68FD7 1165 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 BckdhbQ6P3A8 390 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Vtcn1Q7TSP5 283 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Polr2eQ80UW8 210 aaKnown RBP9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Bola2Q8BGS2 86 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Zbtb46Q8BID6 600 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Psmd5Q8BJY1 504 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Ubr7Q8BU04 425 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Cmtr2Q8BWQ4 767 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Slc9a9Q8BZ00 644 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Lmo3Q8BZL8 145 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 H6pdQ8CFX1 789 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 IntS13Q8QZV7 732 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Acot11Q8VHQ9 594 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Calml4Q91WQ9 153 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Erlin1Q91X78 346 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Cts7Q91ZF2 331 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Pls3Q99K51 630 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 GarsQ9CZD3 729 aaKnown RBP9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Fam111aQ9D2L9 613 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Grtp1Q9D3N8 359 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 AatfQ9JKX4 526 aaKnown RBP9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Il17bQ9QXT6 180 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Smarcb1Q9Z0H3 385 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Muc5acE9QAQ8 3455 aa9□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Myo16Q5DU14 1919 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Trpm6Q8CIR4 2028 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Gm38119A0A0A6YX29 146 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 DohhA0A1Y7VJ29 135 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Gm1661E9Q963 441 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Rgs22G3UYX5 1258 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Taf4bG5E8Z2 855 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 C1ql1O88992 258 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 XlrP05531 208 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Cd44P15379 778 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Irf8P23611 424 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Pax3P24610 479 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Ccnd2P30280 289 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 AdkP55264 361 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 SnrpfP62307 86 aaKnown RBP8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Abi2P62484 446 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Capza3P70190 299 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Tgif1P70284 272 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Cfhr2Q4LDF6 332 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Wdr18Q4VBE8 431 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Spata13Q5DU57 656 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Cacna2d2Q6PHS9 1154 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Tlr11Q6R5P0 926 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 SugctQ7TNE1 436 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Ankzf1Q80UU1 748 aaKnown RBP8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Sdad1Q80UZ2 687 aaKnown RBP8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Wscd1Q80XH4 572 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Mapk15Q80Y86 549 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Ankfy1Q810B6 1169 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Rhpn2Q8BWR8 686 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Ccser1Q8C0C4 895 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Znf830Q8R1N0 363 aaKnown RBP8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Ctage5Q8R311 779 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Pcdhb16Q91Y03 802 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Ppp1r16aQ923M0 524 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Wdr45bQ9CR39 344 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Syf2Q9D198 242 aaKnown RBP8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 D930007J09RikQ9D2K6 131 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Oxct2bQ9ESL0 520 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Nup50Q9JIH2 466 aaKnown RBP8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Oxct2aQ9JJN4 520 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Tlr5Q9JLF7 859 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Tjp2Q9Z0U1 1167 aaKnown RBP8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Speer3W4VSP1 261 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Atg2aQ6P4T0 1914 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Mast4Q811L6 2618 aa8.99□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 TprnA2AI08 749 aaKnown RBP8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Skint6A7XUZ6 1240 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Tmem235B1AQL3 211 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Gm281D3Z1Y0 860 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 1700011I03RikE9PYL8 271 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Dnajc21E9Q8D0 531 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 5830473C10RikF8VQ07 620 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 XntrpcF8VQM8 1264 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Gimap9G3X987 291 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Hoxa9P09631 271 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Lmnb2P21619 596 aaKnown RBP8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Ighmbp2P40694 993 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Ndufs6P52503 116 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 Scarf2P59222 833 aa8.98□□□□□ -0.97
Pdlim5-209ENSMUST00000196908 HmmrQ00547 794 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms