RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Pld5Q3UNN8 536 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Hsph1Q61699 858 aaKnown RBP13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 ChpfQ6IQX7 774 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Zmiz2Q8CIE2 920 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Ankrd54Q91WK7 299 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Pcdha11Q91Y19 950 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 PmpcbQ9CXT8 489 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Taf7lQ9D3R9 471 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 MsraQ9D6Y7 233 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Map2k5Q9WVS7 448 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Tada2bD3Z4Z0 420 aaKnown RBP13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 PtproE9Q612 1226 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Kcng2F7A6P6 480 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Smad1P70340 465 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Slc38a5Q3U1J0 479 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Itga1Q3V3R4 1179 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Shroom1Q5SX79 823 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Orai3Q6P8G8 290 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Tas2r109Q7M707 316 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Sugp1Q8CH02 643 aaKnown RBP13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Prrg2Q8R182 198 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Fam114a2Q8VE88 497 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Nsmce3Q9CPR8 279 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Vwa7Q9JHA8 891 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Kifc1Q9QWT9 674 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Aldh18a1Q9Z110 795 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Mtmr7Q9Z2C9 660 aa13.85□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Lrriq4A6H6A4 596 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Bcl7cO08664 217 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 NumblO08919 604 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Dmp1O55188 503 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Calb2Q08331 271 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Pik3r6Q3U6Q4 756 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Smcr8Q3UMB5 935 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Ndrg1Q62433 394 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Tfdp2Q64163 446 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Zdhhc17Q80TN5 632 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Chmp2bQ8BJF9 213 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Sh2d5Q8JZW5 429 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Plekha4Q8VC98 588 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Gps1Q99LD4 471 aaKnown RBP13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 MutyhQ99P21 515 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Mrps22Q9CXW2 359 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 1700013H16RikQ9DAC5 291 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Prl2a1Q9JHK0 228 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Ccdc86Q9JJ89 426 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Itga9B8JK39 1036 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Trim12cD3Z3L3 497 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Pcdh9F8VPK8 1237 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 LgmnO89017 435 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Slc10a3P21129 473 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Neurog2P70447 263 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Tmem26Q3UP23 366 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Mks1Q5SW45 561 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Slc5a10Q5SWY8 596 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Grb10Q60760 621 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Wdr60Q8C761 999 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Prpf39Q8K2Z2 665 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Pth2rQ91V95 546 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Dtnbp1Q91WZ8 352 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Unc45aQ99KD5 944 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Chmp2aQ9DB34 222 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Dgcr8Q9EQM6 773 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 CitP49025 2055 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Olfr1023A2ASU6 311 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Gm10717D3Z1I8 228 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 DgkdE9PUQ8 1220 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Gm3002E9PW72 216 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 C87414E9PWI7 475 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Ptpn9O35239 593 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 PigrO70570 771 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Slc6a20bO88575 635 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Gdf7P43029 461 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Mrgprx2Q3UG50 352 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Gstt1Q64471 240 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Glra2Q7TNC8 452 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Nipal1Q8BMW7 416 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Rnf208Q8K0W3 265 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Sec63Q8VHE0 760 aaKnown RBP13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Snx9Q91VH2 595 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Sdcbp2Q99JZ0 292 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Pex6Q99LC9 981 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Arl8bQ9CQW2 186 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Tmem59Q9QY73 323 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Rpl9-ps1S4R1R7 191 aa13.84□□□□□ -0.19
Rnf4-204ENSMUST00000182047 Ccdc13D3YV10 709 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ppp1r36D3Z0R2 411 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Zc3h7aE9PWW6 970 aaKnown RBP13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Sept7O55131 436 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Pdcd2P46718 343 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 YwhazP63101 245 aaKnown RBP13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 MylpfP97457 169 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Stt3bQ3TDQ1 823 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Togaram2Q3TYG6 1002 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Psg28Q4KL66 472 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Inppl1Q6P549 1257 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Tas2r102Q7M717 329 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Trpm4Q7TN37 1213 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 SrlQ7TQ48 910 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Cyth4Q80YW0 393 aa13.83□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms