RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Serpina3iD3Z450 408 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 BhmtO35490 407 aaKnown RBP16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Cldn5O54942 218 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Rnf19aP50636 840 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Casp4P70343 373 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Uhmk1P97343 419 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Kiaa1841Q68FF0 718 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Q80Y73 168 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 NfascQ810U3 1240 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Colgalt1Q8K297 617 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 OlahQ8R197 265 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ogfod2Q9CQ04 349 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Serpina1fQ9DCQ7 411 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Rmdn1Q9DCV4 305 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Homer2Q9QWW1 354 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Acox2Q9QXD1 681 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Znf106O88466 1888 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gm21293E9Q4G9 266 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 ShdO88834 343 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Ccnb1P24860 430 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Mmp13P33435 472 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Npas2P97460 816 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Slc24a2Q14BI1 711 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Plcl1Q3USB7 1096 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Sema3cQ62181 751 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Mis18bp1Q80WQ8 998 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Rbm12b1Q80YR9 836 aaKnown RBP16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Clec1aQ8BWY2 269 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Fbxl13Q8CDU4 790 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Slc13a3Q91Y63 600 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 TfQ921I1 697 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 NelfcdQ922L6 591 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 PigxQ99LV7 254 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gimap3Q99MI6 301 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Dnajb4Q9D832 337 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Upf1Q9EPU0 1124 aaKnown RBP16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 QkiQ9QYS9 341 aaKnown RBP16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Arid3bQ9Z1N7 568 aa16.4■□□□□ 0.22
Trim39-203ENSMUST00000113706 Gm42715A0A087WP63 3095 aaKnown RBP16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Lonrf2B2RT44 518 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Lrrc10bG3XA50 292 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Hnrnph1O35737 449 aaKnown RBP16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Emilin3P59900 758 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Lig3P97386 1015 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Hhla1Q3TYV2 514 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gbp4Q61107 620 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ndrg1Q62433 394 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Itga3Q62470 1053 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Krt77Q6IFZ6 572 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 C2cd2lQ80X80 706 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ldhal6bQ8BVP2 382 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pdik1lQ8QZR7 341 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Lpin1Q91ZP3 924 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 CoprsQ9CQ13 173 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 1700013H16RikQ9DAC5 291 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Chmp2aQ9DB34 222 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Tsta3P23591 321 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 YwhahP68510 246 aaKnown RBP16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Rxfp1Q6R6I7 758 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Got1l1Q7TSV6 404 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Wdr59Q8C0M0 992 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ccdc159Q8C963 411 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Lrp8Q924X6 996 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 IqcdQ9D3V1 458 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Scamp5Q9JKD3 235 aa16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 PnkpQ9JLV6 522 aaKnown RBP16.39■□□□□ 0.21
Trim39-203ENSMUST00000113706 Cyp4a29A0A087WPC3 509 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 C7D3YXF5 845 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Tmem265E9Q8G3 109 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gm3383J3QQ59 259 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 PorP37040 678 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fmo3P97501 534 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 CblbQ3TTA7 982 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Trim24Q64127 1051 aaKnown RBP16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Cdkn3Q810P3 211 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Chmp2bQ8BJF9 213 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Tbc1d22aQ8R5A6 516 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pcdhb17Q91VD8 799 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Q9DA42 136 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Atg2aQ6P4T0 1914 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Rtl9Q32KG4 1339 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Scgb2b21A0A087WQA9 112 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pold2O35654 469 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ppef1O35655 650 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 SftpbP50405 377 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 ArvcfP98203 962 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Drc1Q3USS3 753 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Nlrp4fQ66X05 959 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ddit4Q9D3F7 229 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Vmn1r65Q9EPS7 332 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fgf22Q9ESS2 162 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gm13941A2AJ38 245 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 9330159F19RikD3Z623 648 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Zfp94E9Q6Y4 486 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gm13128L7MU96 475 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ctnnal1O88327 731 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Mcpt4P21812 246 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Rab21P35282 222 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Olfm3P63056 478 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Mcm9Q2KHI9 1134 aa16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms