RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 TbcdQ8BYA0 1196 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Olfr449Q8VGW8 311 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pde2aQ922S4 916 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 GsdmcQ99NB5 468 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ror1Q9Z139 937 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Akirin2B1AXD8 201 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rhox13F6YCR7 232 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Sdc4O35988 198 aaKnown RBP12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ptchd3Q0EEE2 906 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Grid2ipQ0QWG9 1203 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Nlrp10Q8CCN1 673 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Aim2Q91VJ1 354 aaKnown RBP12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Etnk2A7MCT6 385 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 G430095P16RikE9Q913 147 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Nat9Q3UG98 241 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Atg16l2Q6KAU8 623 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 DolkQ8R2Y3 534 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Klhl35Q9CZ49 574 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Nacc2Q9DCM7 586 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Trpm1Q2TV84 1622 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm3526E9PZM0 191 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 AK157302I3ITR1 129 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Chst3O88199 472 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Mtnd2P03893 345 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 AprtP08030 180 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Epb41P48193 858 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ripk2P58801 539 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Edrf1Q6GQV7 1239 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Isca1Q9D924 129 aa12.21□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ccdc149F6V035 524 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Stx4P70452 298 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rgs16P97428 201 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 CttnQ60598 546 aaKnown RBP12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Awat2Q6E1M8 333 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Snx8Q8CFD4 459 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Kct2Q8K201 259 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Pbld2Q9CXN7 288 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tnfrsf21Q9EPU5 655 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Nek3Q9R0A5 511 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 H2-Eb1P04230 264 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Entpd7Q3TCT4 606 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tgfbrap1Q3UR70 860 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 DcstampQ7TNJ0 470 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fndc5Q8K4Z2 209 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 B3galt4Q9Z0F0 371 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Taf13P61216 124 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cdkl4Q3TZA2 342 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 MelkQ61846 643 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Zbtb5Q7TQG0 670 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Prkaa2Q8BRK8 552 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Atp6v1g2Q9WTT4 118 aa12.21□□□□□ -0.46
Trim56-201ENSMUST00000054384 Kpna7C0LLJ0 499 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tap1P21958 724 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tab3Q571K4 716 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 WhrnQ80VW5 918 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Lsm14aQ8K2F8 462 aaKnown RBP12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Znf687Q9D2D7 1237 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Racgap1Q9WVM1 628 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Wee1P47810 646 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Kiaa0319Q5SZV5 1081 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Aldh1a2Q62148 518 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 DgkqQ6P5E8 934 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 RragdQ7TT45 449 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Olfr1302Q8VGE9 315 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 PpihQ9D868 188 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ifrd2Q9D8U0 441 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cnga3Q9JJZ8 631 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Pkd2l1A2A259 760 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gm13078A2AGW8 474 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 CidebO70303 219 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 GsapQ3TCV3 858 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Upf3aQ3ULJ3 422 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Syce2Q505B8 171 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Sema5aQ62217 1077 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fam126aQ6P9N1 521 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Zbtb46Q8BID6 600 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ftsj1Q8CBC7 324 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Spag16Q8K450 639 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mtg1Q8R2R6 326 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Vmn2r77L7N2B7 854 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 rp9P97762 213 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 VwdeQ6DFV8 926 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 SyncripQ7TMK9 623 aaKnown RBP12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Prdm5Q9CXE0 599 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Limd1Q9QXD8 668 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cdh16O88338 830 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mmp20P57748 482 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ugt3a1Q3UP75 523 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Dnajc11Q5U458 559 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 SpidrQ8BGX7 933 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 DaglbQ91WC9 669 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tex13bQ99MW5 186 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Lyrm1Q9CQB7 122 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ddit4Q9D3F7 229 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Vav3Q9R0C8 847 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Entpd5Q9WUZ9 427 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mpp2Q9WV34 552 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Esp31A8R0W3 114 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gm16440K7N6G6 218 aa12.2□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gm8271L7N2E2 218 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms