RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Acot13Q9CQR4 140 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Ankef1Q9D2J7 775 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Pi16Q9ET66 489 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Gm28168A0A087WNP1 180 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Nedd8P29595 81 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 CartptP56388 129 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 MelkQ61846 643 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 D630039A03RikQ8K0M7 236 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 GsdmcQ99NB5 468 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Pbld2Q9CXN7 288 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Q9D2Q3 444 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Pou5f2Q9DAC9 329 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Cyp3a44Q9EQW4 504 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Ttc23lA6H6E9 458 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Skint11A7XV14 364 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tbx3P70324 741 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Nudt18Q3U2V3 323 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Fam169aQ5XG69 665 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tmem169Q8BG50 297 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Pnma2Q8BHK0 365 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Klhl31Q8BWA5 634 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Fig4Q91WF7 907 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tfap2dQ91ZK0 452 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tubgcp4Q9D4F8 667 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Cyp2c55Q9D816 490 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Cog8Q9JJA2 640 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Cldn3Q9Z0G9 219 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 Kiaa1210E9Q0C6 1637 aa10.08□□□□□ -0.8
Syne1-201ENSMUST00000041639 2210011C24RikA0A087WQ89 206 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 XntrpcF8VQM8 1264 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Slx1bQ8BX32 270 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Rtfdc1Q99K95 307 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Fam227aQ9D3V8 625 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Trpc2Q9R244 1172 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Setbp1Q9Z180 1582 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Glud1P26443 558 aaKnown RBP10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Capza2P47754 286 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Vsx2Q61412 361 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Prrg3Q6PAQ9 231 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Ccdc32Q8BS39 179 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Castor2Q8CAB8 329 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 GarsQ9CZD3 729 aaKnown RBP10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 2010005H15RikQ9D8D6 97 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Fndc1E9Q043 1732 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Zfp277E9Q6D6 583 aaKnown RBP10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Folh1O35409 752 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 S100a13P97352 98 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mtnr1aQ61184 353 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Klra3Q64329 266 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Olfr389Q7TRX7 312 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Taf2Q8C176 1104 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Ppp1r11Q8K1L5 131 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Il31raQ8K5B1 716 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Gtf2h3Q8VD76 309 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Zfyve16Q80U44 1528 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Angpt1O08538 498 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Il1aP01582 270 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Dnmt1P13864 1620 aaKnown RBP10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Rps7P62082 194 aaKnown RBP10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Shroom1Q5SX79 823 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Ifit3Q64345 403 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Gxylt2Q810K9 444 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Rpp40Q8R1F9 363 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tmprss4Q8VCA5 435 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 TraipQ8VIG6 470 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Akr1c21Q91WR5 323 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Q922M7 232 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Atp8b5A3FIN4 1183 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Atoh1P48985 351 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 CkbQ04447 381 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 DselQ0VBN2 1207 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Igdcc3Q8BQC3 813 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Prdm8Q8BZ97 687 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mcoln2Q8K595 566 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Dpy30Q99LT0 99 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mtfr1lQ9CWE0 289 aa10.07□□□□□ -0.8
Syne1-201ENSMUST00000041639 Siah3B2RWG3 268 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Gm3264L7N2C5 238 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Birc5O70201 140 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Vti1bO88384 232 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Magea8O89012 320 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Lmnb1P14733 588 aaKnown RBP10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Erp29P57759 262 aaKnown RBP10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Clec4fP70194 548 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 TraddQ3U0V2 310 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mrgprx2Q3UG50 352 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 SpidrQ8BGX7 933 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Spon2Q8BMS2 330 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Trpv3Q8K424 791 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Rnf8Q8VC56 488 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Map3k21Q8VDG6 1002 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Lyrm1Q9CQB7 122 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mrfap1Q9CQL7 125 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Inpp4aQ9EPW0 939 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Apold1E9Q0X2 246 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Vmn2r4K7N784 913 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 ClockO08785 855 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Fgfr2P21803 821 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Znf112Q0VAW7 879 aa10.06□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tssk1bQ61241 365 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms