RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Tmem39bQ810L4 492 aa10.96□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Sephs1Q8BH69 392 aa10.96□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ccdc184Q8BMK5 191 aa10.96□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Olfr1416Q8VGU4 312 aa10.96□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Snx2Q9CWK8 519 aa10.96□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Pold3Q9EQ28 462 aa10.96□□□□□ -0.66
Rnf40-201ENSMUST00000033088 NumbQ9QZS3 653 aa10.96□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Htra1Q9R118 480 aa10.96□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Mpp2Q9WV34 552 aa10.96□□□□□ -0.66
Rnf40-201ENSMUST00000033088 TprnA2AI08 749 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Gm8267E9Q207 261 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Pcdh9F8VPK8 1237 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Eif3dO70194 548 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Sema3fO88632 785 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Nr3c1P06537 783 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Serpinh1P19324 417 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 LynP25911 512 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ccna2P51943 422 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Gm4981Q3ULJ8 291 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Slc9b2Q5BKR2 547 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Nudt16Q6P3D0 195 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Dars2Q8BIP0 653 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Tmem132cQ8CEF9 1099 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Zswim3Q8CFL8 695 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Fcho1Q8K285 873 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Tnip2Q99JG7 430 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Rgs10Q9CQE5 181 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Adam17Q9Z0F8 827 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Gm21083A0A0G2JFD5 256 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Sec22bO08547 215 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 GclmO09172 274 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 ZfrO88532 1074 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Mpp3O88910 568 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 RxrbP28704 520 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Mbl1P39039 239 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Man1a1P45700 655 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Meis2P97367 477 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Zc3h15Q3TIV5 426 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Akr1clQ3UXL1 322 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Akap14Q3V0I7 536 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Papd5Q68ED3 633 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Pcp4l1Q6W8Q3 68 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Rpl10Q6ZWV3 214 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Sgo2Q7TSY8 1164 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Sel1l3Q80TS8 1137 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Qsox1Q8BND5 748 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 OsgepQ8BWU5 335 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Dhx32Q8BZS9 744 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Depdc1aQ8CIG0 804 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Pip4k2cQ91XU3 421 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 WaslQ91YD9 501 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Twf1Q91YR1 350 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Pla2g12bQ99P27 195 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Dgcr8Q9EQM6 773 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Copg2Q9QXK3 871 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Galk1Q9R0N0 392 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Arfgef1G3X9K3 1846 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ighv11-2A0A075B5R8 117 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Prss51A0A286YDY8 319 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ttll6A4Q9E8 822 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 2010300C02RikE9Q3M9 1175 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 C1qbpO35658 278 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ppargc1aO70343 797 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Mcpt4P21812 246 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Fut11Q8BHC9 489 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Panx3Q8CEG0 392 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Asb2Q8K0L0 634 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 HpdlQ8K248 371 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Tm9sf1Q9DBU0 606 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ddx21Q9JIK5 851 aaKnown RBP10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Tsc22d3Q9Z2S7 137 aa10.95□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Tnip3A0A1D5RMN0 279 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Slc4a5E9Q3M5 1116 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 E230025N22RikG5E8S3 482 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Kng1O08677 661 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Aoc3O70423 765 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Pou4f1P17208 421 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Stt3aP46978 705 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Gli1P47806 1111 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Kcna2P63141 499 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Agxt2Q3UEG6 513 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Eif2dQ61211 570 aaKnown RBP10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Hspa1aQ61696 641 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Srd5a1Q68FF9 255 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Best3Q6H1V1 669 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 DdnQ80TS7 710 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 TxlngQ8BHN1 524 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 MtbpQ8BJS8 894 aaKnown RBP10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 WdpcpQ8C456 722 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Snapc2Q91XA5 359 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 TmlheQ91ZE0 421 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ndufb5Q9CQH3 189 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 TrirQ9D735 173 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 P2yr13Q9D8I2 337 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Serpina1fQ9DCQ7 411 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Trem1Q9JKE2 230 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Map3k6Q9WTR2 1291 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Klhl32A2AJX0 620 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Trim5E9PV98 497 aa10.94□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Apold1E9Q0X2 246 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms