RNA–Protein interactions for RNA: ENSMUST00000025667.12

Rtn3-201, Transcript of Reticulon-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtn3, Length 2,841 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-201ENSMUST00000025667 Stx12Q9ER00 274 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Tmod4Q9JLH8 345 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Copg2Q9QXK3 871 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Smok1Q9QYZ4 484 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 CtsfQ9R013 462 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Duox1A2AQ92 1551 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Gm10477F6SW83 55 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Vmn2r2L7N2E9 908 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 LdhbP16125 334 aaKnown RBP16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 PdgfraP26618 1089 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Msr1P30204 458 aaKnown RBP16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Bcap31Q61335 245 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Supt20hQ7TT00 530 aaKnown RBP16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Epb41l5Q8BGS1 731 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 QpctlQ8BH73 383 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Echs1Q8BH95 290 aaKnown RBP16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Tigd4Q8BUZ3 513 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Galnt13Q8CF93 556 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 GaleQ8R059 347 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Cd300ldQ8VCH2 221 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Pabpc6Q9D4E6 643 aaKnown RBP16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Armc1Q9D7A8 282 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Ror1Q9Z139 937 aa16.4■□□□□ 0.22
Rtn3-201ENSMUST00000025667 Olfr376E9Q4M1 320 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Svs3aF2Z472 265 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Aldh3a1P47739 453 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 ArsbP50429 534 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Htr4P97288 388 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Ubn1Q4G0F8 1135 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Eme2Q56A04 373 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Gm5431Q5NCB3 844 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Kcnh1Q60603 989 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Sema5aQ62217 1077 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Atp2c1Q80XR2 918 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Ireb2Q811J3 963 aaKnown RBP16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Prdx6bQ8BG37 224 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Oma1Q9D8H7 521 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Sgk1Q9WVC6 431 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Padi4Q9Z183 666 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Dock5B2RY04 1868 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Gm30191A0A0U1RNT7 187 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Zmynd8A2A484 1235 aaKnown RBP16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Lilra5D3Z7A9 295 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Zfp946F6VWU8 523 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Pabpc4lG5E8X2 370 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Aqp4P55088 323 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Q3TQQ9 903 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 FaxcQ3UMF9 409 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Prkaa1Q5EG47 559 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Pik3r5Q5SW28 871 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Krt73Q6NXH9 539 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Cyp2c54Q6XVG2 490 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Zfp398Q8BV16 643 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Catsper4Q8BVN3 442 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Fem1cQ8CEF1 617 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Nsmce2Q91VT1 247 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Natd1Q9DBW3 110 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Arhgef7Q9ES28 862 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Habp4Q9JKS5 411 aaKnown RBP16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Dach1Q9QYB2 751 aa16.39■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Klhdc7aA2APT9 773 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Vmn2r59E9PUT5 865 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Erp29P57759 262 aaKnown RBP16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Gabrb2P63137 512 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Grm4Q68EF4 912 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Ube2q1Q7TSS2 422 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Btbd7Q8CFE5 1130 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Snapc1Q8K0S9 389 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Ndufa5Q9CPP6 116 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Pfdn1Q9CWM4 122 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Q9D1K7 174 aaKnown RBP16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Rnf103Q9R1W3 683 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Gm45233A0A0N4SVE0 221 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Il3P01586 166 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 CtscP97821 462 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Frmd8Q3UFK8 466 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Exoc3l1Q8BI71 739 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Sphk1Q8CI15 382 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 NepnQ9CQ76 512 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 EtfbQ9DCW4 255 aaKnown RBP16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Anxa9Q9JHQ0 345 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Ccr10Q9JL21 362 aa16.38■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Slc16a2O70324 545 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Cma1P21844 247 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Atp6v0d1P51863 351 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Lypla1P97823 230 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Tfdp1Q08639 410 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Sult1d1Q3UZZ6 295 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Gm12185Q5NCB2 835 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Ddx5Q61656 614 aaKnown RBP16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Rbm15bQ6PHZ5 887 aaKnown RBP16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Ddx55Q6ZPL9 600 aaKnown RBP16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Deup1Q7M6Y5 601 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Ccdc116Q80X53 541 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 DglucyQ8BH86 617 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 UvragQ8K245 698 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Timm22Q9CQ85 194 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Cnbd2Q9D5U8 673 aa16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Ddx24Q9ESV0 857 aaKnown RBP16.37■□□□□ 0.21
Rtn3-201ENSMUST00000025667 Nap1l5Q9JJF0 156 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms