RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Adamts6D3Z1A5 1117 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Maml3D4QGC2 1135 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Gm10722F6VLK5 217 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 TxnP10639 105 aaKnown RBP16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Glb1P23780 647 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 MafP54843 370 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Pdp2Q504M2 532 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Znf185Q62394 352 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Tcaf3Q6QR59 914 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Zbtb41Q811F1 908 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Acap1Q8K2H4 740 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Cnot6Q8K3P5 557 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 McmbpQ8R3C0 642 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Tas1r2Q925I4 843 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Tmbim4Q9DA39 238 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 PyglQ9ET01 850 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Rgs17Q9QZB0 210 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Cdh23Q99PF4 3354 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 0610012G03RikA0A0J9YTR2 95 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Olfr1354E9Q5G9 310 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Gm7694J3QNH8 270 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Clk2O35491 499 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Acot1O55137 419 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Phka1P18826 1241 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Mxd1P50538 227 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Dsc2P55292 902 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Pde1aQ61481 565 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Akap7Q7TN79 314 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Catsper3Q80W99 395 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Iqsec1Q8R0S2 961 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Afg3l1Q920A7 789 aaKnown RBP16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Actr3Q99JY9 418 aaKnown RBP16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Igdcc4Q9EQS9 1252 aa16.68■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ankfn1A0A140LIW7 1083 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Krt10P02535 570 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Rpl5P47962 297 aaKnown RBP16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 LeprP48356 1162 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Psmb4P99026 264 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ptgs2Q05769 604 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Otud6aQ6IE21 290 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Q8BGA7 448 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Lin52Q8CD94 116 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Pcdhb1Q91Y08 818 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ino80bQ99PT3 375 aaKnown RBP16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Klhl35Q9CZ49 574 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Serpina1fQ9DCQ7 411 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Msh5Q9QUM7 833 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Sh2d4bA6X942 431 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ces1bD3Z5G7 567 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 DcxO88809 366 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 NxnP97346 435 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Adcy6Q01341 1165 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 ItpkcQ7TS72 678 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 NaprtQ8CC86 538 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 TwnkQ8CIW5 685 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 C1qtnf12Q8R2Z0 308 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Gstm4Q8R5I6 218 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Trim7Q923T7 510 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 PompQ9CQT5 141 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 PollQ9QXE2 573 aaKnown RBP16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 Iigp1Q9QZ85 413 aa16.67■□□□□ 0.26
Trim28-201ENSMUST00000005705 PtgisO35074 501 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Dlg3P70175 849 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 PrkcqQ02111 707 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Q5XFZ0 217 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Dennd2cQ6P9P8 914 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ddx55Q6ZPL9 600 aaKnown RBP16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 March4Q80TE3 409 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Tbx10Q810F8 385 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Stk32aQ8BGW6 398 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 ItchQ8C863 864 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ssx2ipQ8VC66 615 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Krt7Q9DCV7 457 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 IcmtQ9EQK7 283 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Smad9Q9JIW5 430 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Tspan3Q9QY33 253 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Tle6Q9WVB3 581 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Olfr1305A2AVW3 312 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Arhgef26D3YYY8 869 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Vmn2r59E9PUT5 865 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 EpoP07321 192 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Prim2P33610 505 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Klhl23Q6GQU2 558 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Wscd1Q80XH4 572 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 6820408C15RikQ8BJX2 354 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 GldcQ91W43 1025 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 GatbQ99JT1 557 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Dpp3Q99KK7 738 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Fam227aQ9D3V8 625 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ddx39bQ9Z1N5 428 aaKnown RBP16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Megf6Q80V70 1572 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Scn1aA2APX8 2009 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Cyp2b13A6H6J2 491 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Fam167bP17257 162 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Gabrb2P63137 512 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Fscn2Q32M02 492 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Q3TQQ9 903 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Cand1Q6ZQ38 1230 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Rps27lQ6ZWY3 84 aaKnown RBP16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Arhgap15Q811M1 481 aa16.66■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms