RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 BTBD10Q9BSF8 475 aa17.39■□□□□ 0.38
PHGDH-223ENST00000641597 SEPT10Q9P0V9 454 aa17.39■□□□□ 0.38
PHGDH-223ENST00000641597 DPYSL4O14531 572 aa17.39■□□□□ 0.37
PHGDH-223ENST00000641597 BEST1O76090 585 aa17.39■□□□□ 0.37
PHGDH-223ENST00000641597 SNAI1O95863 264 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-223ENST00000641597 AMHP03971 560 aa17.39■□□□□ 0.37
PHGDH-223ENST00000641597 SMPD1P17405 629 aa17.39■□□□□ 0.37
PHGDH-223ENST00000641597 ACAT1P24752 427 aaKnown RBP17.39■□□□□ 0.37
PHGDH-223ENST00000641597 HIC1Q14526 733 aa17.39■□□□□ 0.37
PHGDH-223ENST00000641597 IFNLR1Q8IU57 520 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-223ENST00000641597 TMEM40Q8WWA1 233 aa17.39■□□□□ 0.37
PHGDH-223ENST00000641597 NSL1Q96IY1 281 aa17.39■□□□□ 0.37
PHGDH-223ENST00000641597 MROH8Q9H579 483 aa17.39■□□□□ 0.37
PHGDH-223ENST00000641597 PNPLA8Q9NP80 782 aa17.39■□□□□ 0.37
PHGDH-223ENST00000641597 LNPEPQ9UIQ6 1025 aa17.39■□□□□ 0.37
PHGDH-223ENST00000641597 A6NJR5 290 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 MFSD11O43934 449 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 RECQL4O94761 1208 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 GRM5P41594 1212 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 MAGEA3P43357 314 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 NDUFV1P49821 464 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 AQP5P55064 265 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 KDSRQ06136 332 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 SOX4Q06945 474 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-223ENST00000641597 PPTC7Q8NI37 304 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 ADAM32Q8TC27 787 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 NRG4Q8WWG1 115 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 FAM149B1Q96BN6 582 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 EBNA1BP2Q99848 306 aaKnown RBP17.38■□□□□ 0.37
PHGDH-223ENST00000641597 ZNF670Q9BS34 389 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 TLE6Q9H808 572 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-223ENST00000641597 PPARGC1AQ9UBK2 798 aaKnown RBP17.38■□□□□ 0.37
PHGDH-223ENST00000641597 PLXNA1Q9UIW2 1896 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 H3BRJ5 948 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 SMAPO00193 183 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 MDM4O15151 490 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 ITM2AO43736 263 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 USP12O75317 370 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 WFS1O76024 890 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 ABCG1P45844 678 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 ALDH18A1P54886 795 aaKnown RBP17.38■□□□□ 0.37
PHGDH-223ENST00000641597 NBPF20Q3BBV1 942 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 PPM1JQ5JR12 505 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 PRAMEF19Q5SWL8 479 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 CATSPER4Q7RTX7 472 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 NUDCD3Q8IVD9 361 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 DEPDC1BQ8WUY9 529 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 TEKT4Q8WW24 435 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 E2F7Q96AV8 911 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 ATXN7L3BQ96GX2 97 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 SNX27Q96L92 541 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 C11orf84Q9BUA3 381 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-223ENST00000641597 SAR1AQ9NR31 198 aa17.38■□□□□ 0.37
PHGDH-223ENST00000641597 MRPL42Q9Y6G3 142 aaKnown RBP17.38■□□□□ 0.37
PHGDH-223ENST00000641597 ASB14A6NK59 587 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 CCDC22O60826 627 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 PDHA1P08559 390 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 ESRRAP11474 423 aaPredicted RBP17.37■□□□□ 0.37
PHGDH-223ENST00000641597 TSHRP16473 764 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 KCNA4P22459 653 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 RASSF2P50749 326 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 UBAP2LQ14157 1087 aaKnown RBP17.37■□□□□ 0.37
PHGDH-223ENST00000641597 DPYSL2Q16555 572 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 TEX44Q53QW1 395 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 C9orf57Q5W0N0 161 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 GSDMBQ8TAX9 411 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 ZNF398Q8TD17 642 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 KATNBL1Q9H079 304 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 RNF181Q9P0P0 153 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 MGAT1P26572 445 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 PGGT1BP53609 377 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 RPL10AP62906 217 aaKnown RBP17.37■□□□□ 0.37
PHGDH-223ENST00000641597 POU5F1BQ06416 359 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 PPIL2Q13356 520 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 RCN1Q15293 331 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 ZNF792Q3KQV3 632 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 HEATR6Q6AI08 1181 aaKnown RBP17.37■□□□□ 0.37
PHGDH-223ENST00000641597 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.37■□□□□ 0.37
PHGDH-223ENST00000641597 NAF1Q96HR8 494 aaKnown RBP17.37■□□□□ 0.37
PHGDH-223ENST00000641597 ZNF408Q9H9D4 720 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 ACSS2Q9NR19 701 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 ZNF358Q9NW07 568 aa17.37■□□□□ 0.37
PHGDH-223ENST00000641597 MTO1Q9Y2Z2 717 aaKnown RBP17.37■□□□□ 0.37
PHGDH-223ENST00000641597 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 FAM159BA6NKW6 160 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 MEI4A8MW99 385 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 CREB3O43889 395 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 GSRP00390 522 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 ALDOAP04075 364 aaKnown RBP17.36■□□□□ 0.37
PHGDH-223ENST00000641597 OCRLQ01968 901 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 AP1B1Q10567 949 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 DEFB106AQ8N104 65 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 RNF169Q8NCN4 708 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 KIAA1257Q9ULG3 409 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 SUFUQ9UMX1 484 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 WASF2Q9Y6W5 498 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 ZSWIM8A7E2V4 1837 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 KCNK1O00180 336 aa17.36■□□□□ 0.37
PHGDH-223ENST00000641597 SPAG6O75602 509 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms