RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ADAM33Q9BZ11 813 aa17.5■□□□□ 0.39
PHGDH-213ENST00000641272 CIPCQ9C0C6 399 aa17.5■□□□□ 0.39
PHGDH-213ENST00000641272 CAPN10Q9HC96 672 aa17.5■□□□□ 0.39
PHGDH-213ENST00000641272 RALYQ9UKM9 306 aaKnown RBP17.5■□□□□ 0.39
PHGDH-213ENST00000641272 MEI4A8MW99 385 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 MSI1O43347 362 aaKnown RBP17.49■□□□□ 0.39
PHGDH-213ENST00000641272 STX10O60499 249 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 TSPAN3O60637 253 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 ZBED1O96006 694 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 SERPINF2P08697 491 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 PRKCHP24723 683 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 HOXD12P35452 270 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 CHKAP35790 457 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 BCAT1P54687 386 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 CUL2Q13617 745 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 RAB41Q5JT25 222 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 ARHGAP18Q8N392 663 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 HDDC3Q8N4P3 179 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 ANKRD52Q8NB46 1076 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 UBA3Q8TBC4 463 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 DDI1Q8WTU0 396 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 TSG101Q99816 390 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 DCLK3Q9C098 648 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 SLC32A1Q9H598 525 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 LRRC4Q9HBW1 653 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 FBXO10Q9UK96 956 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 WASF3Q9UPY6 502 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 ZNF510Q9Y2H8 683 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 SLC27A6Q9Y2P4 619 aa17.49■□□□□ 0.39
PHGDH-213ENST00000641272 GFRA2O00451 464 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 SLC16A3O15427 465 aaKnown RBP17.48■□□□□ 0.39
PHGDH-213ENST00000641272 HYAL3O43820 417 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-213ENST00000641272 OPHN1O60890 802 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 CYBBP04839 570 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 PROS1P07225 676 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 SLC8A3P57103 927 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 SIM1P81133 766 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-213ENST00000641272 ZNF234Q14588 700 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 SGO2Q562F6 1265 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 ANKRD40Q6AI12 368 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 FMNL3Q8IVF7 1028 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 FMR1NBQ8N0W7 255 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-213ENST00000641272 TTC39CQ8N584 583 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 CEP76Q8TAP6 659 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 PLD4Q96BZ4 506 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 CCDC34Q96HJ3 373 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 MKRN2Q9H000 416 aaKnown RBP17.48■□□□□ 0.39
PHGDH-213ENST00000641272 PRDM16Q9HAZ2 1276 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 RMND1Q9NWS8 449 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 THAP10Q9P2Z0 257 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-213ENST00000641272 HESX1Q9UBX0 185 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 SFMBT1Q9UHJ3 866 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 IGF2RP11717 2491 aa17.48■□□□□ 0.39
PHGDH-213ENST00000641272 PIK3R2O00459 728 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 XPO1O14980 1071 aaKnown RBP17.47■□□□□ 0.39
PHGDH-213ENST00000641272 CALCAP01258 141 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 HLA-EP13747 358 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 CD6P30203 668 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 RGS7P49802 495 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 FAM193AP78312 1265 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 BST2Q10589 180 aaKnown RBP17.47■□□□□ 0.39
PHGDH-213ENST00000641272 SEMA3BQ13214 749 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 PLEKHG6Q3KR16 790 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 ZNF658Q5TYW1 1059 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-213ENST00000641272 ISM2Q6H9L7 571 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 PIP4P1Q86T03 277 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 SIX6OS1Q8N1H7 587 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 ZNF276Q8N554 614 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 ZCCHC9Q8N567 271 aaKnown RBP17.47■□□□□ 0.39
PHGDH-213ENST00000641272 ZNF366Q8N895 744 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 UCMAQ8WVF2 138 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 TOE1Q96GM8 510 aaKnown RBP17.47■□□□□ 0.39
PHGDH-213ENST00000641272 PIWIL1Q96J94 861 aaKnown RBP17.47■□□□□ 0.39
PHGDH-213ENST00000641272 IPO9Q96P70 1041 aaKnown RBP17.47■□□□□ 0.39
PHGDH-213ENST00000641272 GPR174Q9BXC1 333 aa17.47■□□□□ 0.39
PHGDH-213ENST00000641272 YJEFN3A6XGL0 299 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 KCNJ18B7U540 433 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 E7ENQ6 273 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 O00370 1275 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 ARHGAP33O14559 1287 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 SYNCRIPO60506 623 aaKnown RBP17.46■□□□□ 0.39
PHGDH-213ENST00000641272 EPHX1P07099 455 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 NCAM1P13591 858 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 LCP1P13796 627 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 HOXD9P28356 352 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-213ENST00000641272 SGSHP51688 502 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 TMEM215Q68D42 235 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 RABEPKQ7Z6M1 372 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 FAM124AQ86V42 546 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 ZC3H3Q8IXZ2 948 aaKnown RBP17.46■□□□□ 0.39
PHGDH-213ENST00000641272 CPXM2Q8N436 756 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 RNF139Q8WU17 664 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 SLC35C1Q96A29 364 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 CAMK1GQ96NX5 476 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 TMEM121BQ9BXQ6 578 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-213ENST00000641272 MIR1-1HGQ9H1L0 117 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 USP36Q9P275 1121 aaKnown RBP17.46■□□□□ 0.39
PHGDH-213ENST00000641272 KLK13Q9UKR3 277 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 ZMIZ1Q9ULJ6 1067 aa17.46■□□□□ 0.39
PHGDH-213ENST00000641272 YWHAEP62258 255 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms