RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 HSFX1Q9UBD0 423 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 PABPC4LP0CB38 370 aaKnown RBP12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 GLRA2P23416 452 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 GTF2A2P52657 109 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 PKNOX1P55347 436 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 JAM2P57087 298 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 RALGDSQ12967 914 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 ZNF792Q3KQV3 632 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 MAP3K21Q5TCX8 1036 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 MFSD5Q6N075 450 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 CASC4Q6P4E1 433 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 ARMCX2Q7L311 632 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 TRABD2AQ86V40 505 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 RASGEF1CQ8N431 466 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 OLIG1Q8TAK6 271 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 TRAPPC12Q8WVT3 735 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 ATP2A3Q93084 1043 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 TMIGD2Q96BF3 282 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 ARHGAP28Q9P2N2 729 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 DAPK2Q9UIK4 370 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 GRID1Q9ULK0 1009 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 RABL2BQ9UNT1 228 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 FAM58BPP0C7Q3 252 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 MAN1A1P33908 653 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 STAT5BP51692 787 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 ALCAMQ13740 583 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 BMPR2Q13873 1038 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 CENPUQ71F23 418 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 AGPAT1Q99943 283 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 NIFKQ9BYG3 293 aaKnown RBP12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 USP29Q9HBJ7 922 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 INIPQ9NRY2 104 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 TOPORSQ9NS56 1045 aaPredicted RBP12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 PSMC3IPQ9P2W1 217 aaPredicted RBP12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 DSEQ9UL01 958 aa12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 APOBEC2Q9Y235 224 aaKnown RBP12.24□□□□□ -0.45
RBFOX1-224ENST00000641259 A8MXQ7 604 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 HNRNPCL1O60812 293 aaKnown RBP12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 MAP4P27816 1152 aaKnown RBP12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 ALDH1A3P47895 512 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 VCPP55072 806 aaKnown RBP12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 DNAL1Q4LDG9 190 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 METTL21CQ5VZV1 264 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 TMC5Q6UXY8 1006 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 TMEM174Q8WUU8 243 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 GAB3Q8WWW8 586 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 EIF2AQ9BY44 585 aaKnown RBP12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 MARCH7Q9H992 704 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 ITM2BQ9Y287 266 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 EMSYQ7Z589 1322 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 GJB1P08034 283 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 TGFB3P10600 412 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 SAT1P21673 171 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 RCVRNP35243 200 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 TRAF2Q12933 501 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 ACVR2BQ13705 512 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 NEDD8Q15843 81 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 C11orf63Q6NUN7 778 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 TAPT1Q6NXT6 567 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 PRR23CQ6ZRP0 262 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 C12orf56Q8IXR9 622 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 EXOC8Q8IYI6 725 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 KAT5Q92993 513 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 CNGB3Q9NQW8 809 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 GMEB1Q9Y692 573 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 DCAF8L1A6NGE4 600 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 NKX2-5P52952 324 aaPredicted RBP12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 DPH6Q7L8W6 267 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 XXYLT1Q8NBI6 393 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 MCPH1Q8NEM0 835 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 PDZD8Q8NEN9 1154 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 SEPT1Q8WYJ6 367 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 SPATA33Q96N06 139 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 TTC25Q96NG3 672 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 KATNBL1Q9H079 304 aa12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 DDX28Q9NUL7 540 aaKnown RBP12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 RSL24D1Q9UHA3 163 aaKnown RBP12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 GPC6Q9Y625 555 aaPredicted RBP12.23□□□□□ -0.45
RBFOX1-224ENST00000641259 ITGBL1O95965 494 aaPredicted RBP12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 TXNP10599 105 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 PSMC3P17980 439 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 ARL2P36404 184 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 VAMP7P51809 220 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 ARPC4P59998 168 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 CD300CQ08708 224 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 NR1D2Q14995 579 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 SNRNP35Q16560 246 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 ZDHHC14Q8IZN3 488 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 SHCBP1Q8NEM2 672 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 FNDC8Q8TC99 324 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 TMA16Q96EY4 203 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 INTS2Q9H0H0 1204 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 WWP1Q9H0M0 922 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 STRIP2Q9ULQ0 834 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 PLA2G4CQ9UP65 541 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 DIS3Q9Y2L1 958 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 ESRRBO95718 433 aa12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 PDAP1Q13442 181 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-224ENST00000641259 LRRC71Q8N4P6 559 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms